ggKbase home page

L1_008_364G1_scaffold_824

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_824_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..547
DNA (546bp) protein (182aa)
Exonuclease SbcC n=52 Tax=Escherichia coli RepID=E1P9B0_ECOAB
exonuclease subunit SbcC
Nuclease sbcCD subunit C {ECO:0000313|EMBL:EZJ54414.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L1_008_364G1_scaffold_824_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

589..1857
DNA (1269bp) protein (423aa)
Protein araJ n=132 Tax=Escherichia RepID=D5CVU2_ECOKI
MFS transport protein AraJ
AraJ MFS transporter {ECO:0000313|EMBL:ABE05917.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L1_008_364G1_scaffold_824_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2126..2920)
DNA (795bp) protein (265aa)
mak; fructokinase (EC:2.7.1.4)
Glucokinase, ROK family {ECO:0000313|EMBL:CDK72104.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CDK72104.1};; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
Fructokinase n=1 Tax=Escherichia coli DEC6D RepID=H4VSK2_ECOLX
L1_008_364G1_scaffold_824_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2979..3956
DNA (978bp) protein (326aa)
Recombination-associated protein rdgC n=3 Tax=Escherichia coli RepID=R8XHY1_ECOLX
rdgC; Recombination-associated protein rdgC
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L1_008_364G1_scaffold_824_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4317..4499
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli B093 RepID=H1DZZ6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX32792.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L1_008_364G1_scaffold_824_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4603..4887)
DNA (285bp) protein (95aa)
UPF0345 protein YaiE n=1379 Tax=Enterobacteriaceae RepID=YAIE_ECO24
hypothetical protein
UPF0345 protein YaiE {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L1_008_364G1_scaffold_824_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4959..5636)
DNA (678bp) protein (226aa)
Protein of aro operon, regulated by aroR n=315 Tax=Escherichia RepID=A1A862_ECOK1
aroM; AroM protein
AroM family protein {ECO:0000313|EMBL:KEJ62255.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L1_008_364G1_scaffold_824_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5894..6085)
DNA (192bp) protein (64aa)
Uncharacterized protein n=141 Tax=Escherichia RepID=B7MD48_ECO45
yaiA; hypothetical protein
Protein {ECO:0000313|EMBL:CKH80975.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_364G1_scaffold_824_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6135..6659)
DNA (525bp) protein (175aa)
aroL; shikimate kinase (EC:2.7.1.71)
Shikimate kinase 2 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003442}; Short=SK 2 {ECO:0000256|HAMAP-Rule:MF_01269};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003395};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Shikimate kinase 2 n=126 Tax=Escherichia RepID=AROL_ECO45
L1_008_364G1_scaffold_824_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6842..7300)
DNA (459bp) protein (153aa)
UPF0178 protein YaiI n=7 Tax=Escherichia coli RepID=H5KR33_ECOLX
yaiI; hypothetical protein
UPF0178 protein YaiI {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L1_008_364G1_scaffold_824_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7420..8229
DNA (810bp) protein (270aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Pyrroline-5-carboxylate reductase n=79 Tax=Escherichia RepID=Q1RFF8_ECOUT
L1_008_364G1_scaffold_824_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8246..9361)
DNA (1116bp) protein (372aa)
Uncharacterized protein yaiC n=155 Tax=Escherichia RepID=E2QGD0_ECOLX
adrA; diguanylate cyclase AdrA
Putative diguanylate cyclase AdrA {ECO:0000313|EMBL:EZJ54402.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L1_008_364G1_scaffold_824_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9463..9783)
DNA (321bp) protein (107aa)
Phosphate starvation-inducible protein PsiF n=1242 Tax=Enterobacteriaceae RepID=PSIF_ECOL6
PsiF repeat protein
PsiF repeat protein {ECO:0000313|EMBL:ESA82020.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L1_008_364G1_scaffold_824_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9902..11317)
DNA (1416bp) protein (472aa)
phoA; alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase H {ECO:0000313|EMBL:EHU48184.1}; EC=3.1.3.1 {ECO:0000313|EMBL:EHU48184.1};; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
Alkaline phosphatase n=122 Tax=Escherichia coli RepID=E2QGC8_ECOLX
L1_008_364G1_scaffold_824_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11418..11678)
DNA (261bp) protein (87aa)
Anti-adapter protein IraP n=388 Tax=Escherichia RepID=IRAP_ECO27
yaiB; hypothetical protein
Anti-adapter protein IraP {ECO:0000256|HAMAP-Rule:MF_01198}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L1_008_364G1_scaffold_824_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12141..13235
DNA (1095bp) protein (365aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
D-alanine--D-alanine ligase A n=313 Tax=Escherichia RepID=DDLA_ECOL6
L1_008_364G1_scaffold_824_17
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13259..13471)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Shigella dysenteriae RepID=Q32JC7_SHIDS
yaiZ; putative membrane protein YaiZ
Putative membrane protein {ECO:0000313|EMBL:EIQ35087.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L1_008_364G1_scaffold_824_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13731..14039
DNA (309bp) protein (103aa)
Inner membrane protein YaiY n=1293 Tax=Enterobacteriaceae RepID=YAIY_ECO57
hypothetical protein
Inner membrane protein yaiY {ECO:0000313|EMBL:EOV97040.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L1_008_364G1_scaffold_824_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14098..15192)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=107 Tax=Escherichia RepID=Q1RFG9_ECOUT
yaiW; lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EHU43687.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L1_008_364G1_scaffold_824_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15205..16425)
DNA (1221bp) protein (407aa)
Protein sbmA n=407 Tax=Enterobacteriaceae RepID=E2QGC2_ECOLX
sbmA; transport protein
Protein sbmA {ECO:0000313|EMBL:KDH01425.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L1_008_364G1_scaffold_824_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16630..16731
DNA (102bp) protein (34aa)
Uncharacterized protein n=213 Tax=Escherichia RepID=J7Q6B1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV82544.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L1_008_364G1_scaffold_824_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16777..17934
DNA (1158bp) protein (386aa)
ampH; D-alanyl-D-alanine-carboxypeptidase/endopeptidaseAmpH precursor (EC:3.4.-.-)
Penicillin-binding protein ampH n=273 Tax=Escherichia RepID=E2QGC1_ECOLX
Penicillin-binding protein {ECO:0000313|EMBL:EHU15817.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L1_008_364G1_scaffold_824_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17935..18558)
DNA (624bp) protein (208aa)
Uncharacterized protein n=212 Tax=Enterobacteriaceae RepID=B7MD33_ECO45
yaiV; DNA-binding transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ABE05891.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L1_008_364G1_scaffold_824_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18644..19579)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Escherichia coli 75 RepID=I4TFK6_ECOLX
outer membrane autotransporter barrel domain protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KEJ71036.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
Displaying 24 items

View Taxonomy