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L1_008_364G1_scaffold_864

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_864_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1896)
DNA (1896bp) protein (632aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y190_BIFBU
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
secA; Protein translocase subunit secA
L1_008_364G1_scaffold_864_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2058..2720)
DNA (663bp) protein (221aa)
Ribosomal subunit interface protein n=3 Tax=Bifidobacterium breve RepID=F6C914_BIFBA
raiA; ribosomal subunit interface protein
Ribosome-associated factor Y {ECO:0000313|EMBL:AHJ21347.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_864_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3265..3864)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZZF9_BIFBR
RecX-like protein
RecX-like protein {ECO:0000313|EMBL:AHJ21348.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_864_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3867..5045)
DNA (1179bp) protein (393aa)
Protein RecA n=4 Tax=Bifidobacterium breve RepID=F6C912_BIFBA
RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_864_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5352..5585)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZJ8_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI84899.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_364G1_scaffold_864_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5681..6199)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGH0_BIFBR
Transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD75419.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_864_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6259..6816)
DNA (558bp) protein (186aa)
Competence-damage protein cinA n=2 Tax=Bifidobacterium breve RepID=F9Y196_BIFBU
Competence-damage protein cinA
Competence-damage protein cinA {ECO:0000313|EMBL:AHJ21352.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_864_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6915..7550)
DNA (636bp) protein (212aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AEF26559.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AEF26559.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Bifidobacterium breve RepID=F6C908_BIFBA
L1_008_364G1_scaffold_864_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7728..10583)
DNA (2856bp) protein (952aa)
Cell division protein ftsK n=2 Tax=Bifidobacterium breve RepID=F9Y198_BIFBU
Cell division protein ftsK {ECO:0000313|EMBL:ABE95864.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
ftsK; Cell division protein ftsK
L1_008_364G1_scaffold_864_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10615..11550
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZM19_BIFBR
Cell filamentation protein fic
Cell filamentation protein fic {ECO:0000313|EMBL:AHJ21355.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_864_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11685..12668)
DNA (984bp) protein (328aa)
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Bifidobacterium breve RepID=UPI0003173540
L1_008_364G1_scaffold_864_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12791..14242)
DNA (1452bp) protein (484aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C904_BIFBA
miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_008_364G1_scaffold_864_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14315..15115
DNA (801bp) protein (267aa)
relA2; GTP pyrophosphokinase (EC:2.7.6.5)
RelA/SpoT domain protein n=5 Tax=Bifidobacterium breve RepID=F6C903_BIFBA
GTP pyrophosphokinase {ECO:0000313|EMBL:AHJ21358.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_864_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15112..16083)
DNA (972bp) protein (324aa)
Putative membrane protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BS63_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:BAR00229.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Transporter, drug/metabolite exporter family
L1_008_364G1_scaffold_864_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16182..17003)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZM14_BIFBR
Hypothetical membrane spanning protein in uncharacterized protein family UPF0005
Uncharacterized protein {ECO:0000313|EMBL:EPD75410.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_864_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17082..17615
DNA (534bp) protein (178aa)
Response regulator of two-component system n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0R9_BIFBR
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE88274.1}; Two-component response regulator {ECO:0000313|EMBL:BAR00231.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
LuxR family transcriptional regulator
L1_008_364G1_scaffold_864_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17665..17868
DNA (204bp) protein (68aa)
Response regulator receiver domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CK40_BIFBR
Transcriptional regulatory protein
Transcriptional regulatory protein {ECO:0000313|EMBL:AHJ21361.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_864_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17932..18570
DNA (639bp) protein (213aa)
GNAT family acetyltransferase n=1 Tax=Bifidobacterium breve RepID=UPI000316F19B
Hypothetical protein in acetyl transferase family
Uncharacterized protein {ECO:0000313|EMBL:AHJ21362.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_864_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18689..19486)
DNA (798bp) protein (266aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Aconitate hydratase 1 n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0R7_BIFBR
Aconitate hydratase
Displaying 19 items

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