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L1_008_364G1_scaffold_911

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_911_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Thiamine biosynthesis protein ThiC n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWJ7_BIFLN
L1_008_364G1_scaffold_911_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(215..1159)
DNA (945bp) protein (315aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Hydroxyethylthiazole kinase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L323_BIFBR
Hydroxyethylthiazole kinase
L1_008_364G1_scaffold_911_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1372..1902
DNA (531bp) protein (177aa)
Hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y223_BIFBU
putative membrane spanning protein
Hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95985.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_911_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1899..2285
DNA (387bp) protein (129aa)
Transcriptional regulator n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y222_BIFBU
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHJ21478.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_911_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2285..2929
DNA (645bp) protein (215aa)
Hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y221_BIFBU
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19679.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_364G1_scaffold_911_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3028..3792
DNA (765bp) protein (255aa)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y220_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE95982.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_911_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3815..4525
DNA (711bp) protein (237aa)
Hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y219_BIFBU
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19677.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_364G1_scaffold_911_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4600..5502
DNA (903bp) protein (301aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glycine--tRNA ligase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRL5_BIFBR
glyS; Glycyl-tRNA synthetase
L1_008_364G1_scaffold_911_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5477..5956
DNA (480bp) protein (160aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Glycine--tRNA ligase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y218_BIFBU
Glycyl-tRNA synthetase suspected. See adjacent gene [L1_008_364G1_scaffold_911_8].
Glycyl-tRNA synthetase
L1_008_364G1_scaffold_911_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6099..7334
DNA (1236bp) protein (412aa)
tRNA-dihydrouridine synthase n=3 Tax=Bifidobacterium breve RepID=F9Y217_BIFBU
tRNA-dihydrouridine synthase
tRNA-dihydrouridine synthase {ECO:0000313|EMBL:AHJ21473.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_911_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7455..8657
DNA (1203bp) protein (401aa)
Cell division protein FtsZ n=5 Tax=Bifidobacterium breve RepID=F6C895_BIFBA
ftsZ; Cell division protein ftsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_364G1_scaffold_911_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8670..9146
DNA (477bp) protein (159aa)
Cell division protein SepF n=4 Tax=Bifidobacterium breve RepID=F6C896_BIFBA
Hypothetical protein with DUF552 domain
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_911_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9258..9560
DNA (303bp) protein (101aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C897_BIFBA
putative membrane spanning protein with YGGT family
Uncharacterized protein {ECO:0000313|EMBL:EPD75644.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_911_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9701..11050
DNA (1350bp) protein (450aa)
DivIVA domain protein n=4 Tax=Bifidobacterium breve RepID=F6C898_BIFBA
Hypothetical protein containing a repeated sequence found in lipoprotein LPP
Uncharacterized protein {ECO:0000313|EMBL:AHJ21469.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_911_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11067..11621
DNA (555bp) protein (185aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Lipoprotein signal peptidase n=6 Tax=Bifidobacterium breve RepID=F6C899_BIFBA
Lipoprotein signal peptidase
L1_008_364G1_scaffold_911_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11621..12565
DNA (945bp) protein (315aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Pseudouridine synthase, RluA family n=5 Tax=Bifidobacterium breve RepID=F6C8A0_BIFBA
Ribosomal large subunit pseudouridine synthase D
L1_008_364G1_scaffold_911_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12576..13625)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C8A1_BIFBA
Hypothetical protein with helix turn helix motif, DeoR family
Uncharacterized protein {ECO:0000313|EMBL:AHJ21466.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_911_18
unknown

Not on your lists

13747..13866
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_364G1_scaffold_911_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13920..17477
DNA (3558bp) protein (1186aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
DNA polymerase III, alpha subunit n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L312_BIFBR
DNA polymerase III alpha subunit
L1_008_364G1_scaffold_911_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17480..17863)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZFY0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75638.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein
L1_008_364G1_scaffold_911_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17966..18847
DNA (882bp) protein (294aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRM7_BIFBR
2,5-diketo-D-gluconic acid reductase A
2,5-diketo-D-gluconic acid reductase A {ECO:0000313|EMBL:AHJ21464.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_911_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19025..20902
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRM8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE88873.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Myosin-crossreactive antigen
Displaying 22 items

View Taxonomy