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L1_008_364G1_scaffold_923

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_923_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..398)
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L051_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39065.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_364G1_scaffold_923_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(501..2015)
DNA (1515bp) protein (505aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Bacteroides RepID=GPMI_BACV8
L1_008_364G1_scaffold_923_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2464..3444
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEM2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02508.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transcriptional regulator, FucR
L1_008_364G1_scaffold_923_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3466..5241
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
fucI; sugar isomerase (EC:5.3.1.25)
L-fucose isomerase n=13 Tax=Bacteroides RepID=FUCI_BACV8
L1_008_364G1_scaffold_923_5
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5353..6666
DNA (1314bp) protein (438aa)
L-fucose:H+ symporter permease n=2 Tax=Bacteroides RepID=I9UCV7_BACVU
L-fucose permease
L-fucose:H+ symporter permease {ECO:0000313|EMBL:CDF19076.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_923_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6809..7414)
DNA (606bp) protein (202aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Ribonuclease HII n=8 Tax=root RepID=RNH2_BACV8
L1_008_364G1_scaffold_923_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7516..9141
DNA (1626bp) protein (542aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L045_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EFV69347.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_008_364G1_scaffold_923_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9365..12493
DNA (3129bp) protein (1043aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6YZ56_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET13924.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_008_364G1_scaffold_923_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12514..14031
DNA (1518bp) protein (506aa)
SusD family protein n=2 Tax=Bacteroides RepID=C6YZ57_9BACE
SusD family protein {ECO:0000313|EMBL:EET13925.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
starch-binding protein
L1_008_364G1_scaffold_923_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14146..14427
DNA (282bp) protein (94aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A6L042_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02501.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_923_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14424..15026
DNA (603bp) protein (201aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q3T2_9BACE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56844.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_364G1_scaffold_923_12
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15040..18048
DNA (3009bp) protein (1003aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
Beta-galactosidase n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IAZ2_9BACE
glycoside hydrolase
L1_008_364G1_scaffold_923_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18066..18443
DNA (378bp) protein (126aa)
Glycoside hydrolase family 63 n=2 Tax=Bacteroides RepID=E5UN96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79961.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycoside hydrolase
Displaying 13 items

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