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L1_008_364G1_scaffold_956

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_956_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..557)
DNA (555bp) protein (185aa)
Glutamate/aspartate periplasmic-binding protein n=1 Tax=Escherichia coli UMEA 3117-1 RepID=T8R0H9_ECOLX
ybeJ; glutamate and aspartate transporter subunit
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:EHU43936.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L1_008_364G1_scaffold_956_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1011..2888
DNA (1878bp) protein (626aa)
Peptidase, S54 (Rhomboid) family n=46 Tax=Escherichia coli RepID=D5CX98_ECOKI
Uncharacterized protein {ECO:0000313|EMBL:ABE06153.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
hypothetical protein
L1_008_364G1_scaffold_956_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3015..3206)
DNA (192bp) protein (64aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00088950};; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
Apolipoprotein N-acyltransferase n=1 Tax=Escherichia coli TA280 RepID=F4UZN4_ECOLX
L1_008_364G1_scaffold_956_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3203..4504)
DNA (1302bp) protein (434aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00088950};; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Apolipoprotein N-acyltransferase n=80 Tax=Enterobacteriaceae RepID=A1A8S5_ECOK1
lnt; apolipoprotein N-acyltransferase
L1_008_364G1_scaffold_956_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4529..5407)
DNA (879bp) protein (293aa)
Magnesium and cobalt efflux protein CorC n=1409 Tax=Enterobacteriaceae RepID=CORC_ECO57
ybeX; magnesium/cobalt efflux protein CorC
Magnesium and cobalt efflux protein CorC {ECO:0000313|EMBL:EQQ15519.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L1_008_364G1_scaffold_956_6
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5497..5964)
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
Endoribonuclease YbeY n=716 Tax=Enterobacteriaceae RepID=YBEY_ECO24
hypothetical protein
L1_008_364G1_scaffold_956_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5961..7040)
DNA (1080bp) protein (360aa)
PhoH-like protein n=674 Tax=Enterobacteriaceae RepID=C3TJ62_ECOLX
PhoH family protein
PhoH-like protein {ECO:0000313|EMBL:ELJ75657.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L1_008_364G1_scaffold_956_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7154..8578)
DNA (1425bp) protein (475aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=79 Tax=Escherichia RepID=MIAB_ECO45
(dimethylallyl)adenosine tRNA methylthiotransferase
L1_008_364G1_scaffold_956_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8724..9899
DNA (1176bp) protein (392aa)
ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquino l hydroxylase {ECO:0000313|EMBL:CKH88972.1}; EC=1.14.13.- {ECO:0000313|EMBL:CKH88972.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=99 Tax=Escherichia RepID=A1A8T0_ECOK1
L1_008_364G1_scaffold_956_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11140..12804)
DNA (1665bp) protein (555aa)
Asparagine synthase {ECO:0000313|EMBL:KDY50902.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KDY50902.1};; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
Asparagine synthetase n=9 Tax=Escherichia coli RepID=F4SVZ2_ECOLX
asparagine synthetase B
L1_008_364G1_scaffold_956_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13060..13812)
DNA (753bp) protein (251aa)
Ribonucleotide monophosphatase NagD n=1343 Tax=Enterobacteriaceae RepID=NAGD_ECO57
nagD; nagD protein
HAD-superhydrolase, subIIA family protein {ECO:0000313|EMBL:EHU16086.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L1_008_364G1_scaffold_956_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13860..15080)
DNA (1221bp) protein (407aa)
N-acetylglucosamine repressor n=3 Tax=Escherichia coli RepID=L4GLP6_ECOLX
nagC; N-acetylglucosamine repressor
Protein mlc {ECO:0000313|EMBL:EFZ56441.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L1_008_364G1_scaffold_956_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15089..16237)
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
N-acetylglucosamine-6-phosphate deacetylase n=477 Tax=Escherichia RepID=A1A8T6_ECOK1
N-acetylglucosamine-6-phosphate deacetylase
L1_008_364G1_scaffold_956_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16297..17097)
DNA (801bp) protein (267aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Glucosamine-6-phosphate deaminase n=1150 Tax=Enterobacteriaceae RepID=NAGB_ECO24
glucosamine-6-phosphate isomerase
L1_008_364G1_scaffold_956_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17430..18704
DNA (1275bp) protein (425aa)
PTS system N-acetylglucosamine-specific transporter subunit IIBC (EC:2.7.1.69)
PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EHU62350.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EHU62350.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
PTS system N-acetylglucosamine-specific EIICBA component n=9 Tax=Escherichia coli RepID=E3XJ07_ECOLX
L1_008_364G1_scaffold_956_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18658..19221
DNA (564bp) protein (188aa)
PTS system N-acetylglucosamine-specific transporter subunit IIBC (EC:2.7.1.69)
PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EZK03412.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EZK03412.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C1.;"
PTS system, N-acetylglucosamine-specific IIBC component n=1 Tax=Escherichia coli DEC9B RepID=H5BM33_ECOLX
L1_008_364G1_scaffold_956_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19310..20590)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=67 Tax=Escherichia RepID=E1RYY0_ECOUM
hypothetical protein
Membrane transporter {ECO:0000313|EMBL:CKH89249.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_364G1_scaffold_956_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20604..21074)
DNA (471bp) protein (157aa)
LF82 chromosome, complete sequence n=286 Tax=Escherichia coli RepID=E4UEJ1_ECOLX
tabA_1; Toxin-antitoxin biofilm protein TabA
Uncharacterized protein {ECO:0000313|EMBL:ABE06170.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L1_008_364G1_scaffold_956_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21071..22240)
DNA (1170bp) protein (390aa)
BNR/Asp-box repeat protein n=96 Tax=Escherichia RepID=C1HG41_9ESCH
Glycosyl hydrolase, BNR repeat
Hypthetical protein {ECO:0000313|EMBL:CKH89322.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_364G1_scaffold_956_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22305..22625)
DNA (321bp) protein (107aa)
Uncharacterized protein n=70 Tax=Escherichia coli RepID=T2MNG4_ECOLX
hypothetical protein
Integral membrane transport protein {ECO:0000313|EMBL:CKH89348.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_364G1_scaffold_956_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22733..23026)
DNA (294bp) protein (98aa)
Uncharacterized protein n=72 Tax=Escherichia coli RepID=T2MP04_ECOLX
ygdQ_2; hypothetical protein
Integral membrane transport protein {ECO:0000313|EMBL:CKH89381.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_364G1_scaffold_956_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23086..23973)
DNA (888bp) protein (296aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=140 Tax=Escherichia RepID=A1A8U2_ECOK1
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EHU27777.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L1_008_364G1_scaffold_956_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23977..25134)
DNA (1158bp) protein (386aa)
Alcohol dehydrogenase n=101 Tax=Escherichia RepID=T2MNA9_ECOLX
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:EQX31239.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L1_008_364G1_scaffold_956_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25304..26539
DNA (1236bp) protein (412aa)
Uncharacterized protein n=77 Tax=Escherichia RepID=B7MFU4_ECO45
hypothetical protein
Putative inner membrane protein {ECO:0000313|EMBL:CKH89469.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_008_364G1_scaffold_956_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26532..27518
DNA (987bp) protein (329aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
4-hydroxythreonine-4-phosphate dehydrogenase n=229 Tax=Escherichia RepID=E2QI65_ECOLX
L1_008_364G1_scaffold_956_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27520..28281
DNA (762bp) protein (254aa)
Transcriptional regulator n=353 Tax=Escherichia RepID=E2QI66_ECOLX
putative transcriptional regulator, DeoR-family protein
Putative transcriptional regulator {ECO:0000313|EMBL:BAI54157.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L1_008_364G1_scaffold_956_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28501..30072
DNA (1572bp) protein (524aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
Glutamine--tRNA ligase n=402 Tax=Escherichia RepID=SYQ_ECO27
glutaminyl-tRNA synthetase
Displaying 27 items

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