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L1_008_364G1_scaffold_1090

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_1090_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..280
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI000316FFF6
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27302.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_364G1_scaffold_1090_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(435..1358)
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=6 Tax=Bifidobacterium breve RepID=F6C9J1_BIFBA
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD75093.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_1090_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1399..2028)
DNA (630bp) protein (210aa)
HAD hydrolase, family IA, variant 3 n=6 Tax=Bifidobacterium breve RepID=F6C9J0_BIFBA
Haloacid dehalogenase-like hydrolase (HAD superfamily)
Haloacid dehalogenase-like hydrolase (HAD superfamily) {ECO:0000313|EMBL:AHJ19333.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_364G1_scaffold_1090_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2215..3978)
DNA (1764bp) protein (588aa)
Sugar kinase n=2 Tax=Bifidobacterium breve RepID=F9Y090_BIFBU
Sugar kinase
Sugar kinase {ECO:0000313|EMBL:AHJ21150.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_1090_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4150..5124
DNA (975bp) protein (325aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9Y091_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ21151.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_1090_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5121..5690
DNA (570bp) protein (190aa)
ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C9I8_BIFBA
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI86153.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_364G1_scaffold_1090_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5752..6459
DNA (708bp) protein (236aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=5 Tax=Bifidobacterium breve RepID=F6C9I7_BIFBA
Hypothetical protein with short chain dehydrogenase domain
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:AEF26696.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_364G1_scaffold_1090_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6525..7226)
DNA (702bp) protein (234aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9Y093_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE95669.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_1090_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7226..7744)
DNA (519bp) protein (173aa)
ABC-type cobalt transport system permease component n=16 Tax=Bifidobacterium RepID=B3DRU7_BIFLD
ABC transporter permease
Cobalt ABC transporter permease {ECO:0000313|EMBL:KEY33007.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_364G1_scaffold_1090_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8102..9292)
DNA (1191bp) protein (397aa)
Aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II {ECO:0000313|EMBL:AEF27052.1}; EC=2.6.1.- {ECO:0000313|EMBL:AEF27052.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Aminotransferase, class I/II n=6 Tax=Bifidobacterium breve RepID=F6C9I6_BIFBA
L1_008_364G1_scaffold_1090_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9488..12517
DNA (3030bp) protein (1010aa)
excinuclease ABC subunit A n=1 Tax=Bifidobacterium breve RepID=UPI00031418C1
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Excinuclease ABC subunit A
L1_008_364G1_scaffold_1090_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12671..15088
DNA (2418bp) protein (806aa)
UvrABC system protein C n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y096_BIFBU
uvrC; Excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_1090_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15324..16304
DNA (981bp) protein (327aa)
Shikimate dehydrogenase substrate binding domain protein n=2 Tax=Bifidobacterium breve RepID=U2CQ26_BIFBR
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:ERI86163.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Shikimate 5-dehydrogenase
L1_008_364G1_scaffold_1090_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16304..17269
DNA (966bp) protein (322aa)
UPF0042 nucleotide-binding protein HMPREF9228_0870 n=3 Tax=Bifidobacterium breve RepID=F6C9I1_BIFBA
ATP-binding protein (contains P-loop)
Nucleotide-binding protein B2258_0957 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_1090_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17426..18376
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=6 Tax=Bifidobacterium breve RepID=F6C9I0_BIFBA
Hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_1090_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18599..19453
DNA (855bp) protein (285aa)
pgk; Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Phosphoglycerate kinase n=4 Tax=Bifidobacterium breve RepID=F6C9H9_BIFBA
L1_008_364G1_scaffold_1090_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19606..20409
DNA (804bp) protein (268aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Triosephosphate isomerase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPH8_BIFBR
Triosephosphate isomerase
L1_008_364G1_scaffold_1090_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20473..20658
DNA (186bp) protein (62aa)
Preprotein translocase subunit n=20 Tax=Bifidobacterium RepID=B3DRW1_BIFLD
secG; Protein translocase subunit secG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KEY22608.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_364G1_scaffold_1090_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20750..21700
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L-lactate dehydrogenase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPI0_BIFBR
L-lactate dehydrogenase
L1_008_364G1_scaffold_1090_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21697..22548
DNA (852bp) protein (284aa)
Cof-like hydrolase n=2 Tax=Bifidobacterium breve RepID=D4BPI1_BIFBR
Cof-like hydrolase {ECO:0000313|EMBL:EPD75075.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hydrolase, HAD superfamily
L1_008_364G1_scaffold_1090_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22667..24202
DNA (1536bp) protein (512aa)
Aminotransferase, class I/II n=2 Tax=Bifidobacterium breve RepID=D4BPI2_BIFBR
Aminotransferase
Aminotransferase {ECO:0000313|EMBL:AHJ19350.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_364G1_scaffold_1090_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24641..25825)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZE94_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75073.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_1090_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25998..27335)
DNA (1338bp) protein (446aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQ37_BIFBR
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ERI86173.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Branched chain amino acid transport system II carrier protein
L1_008_364G1_scaffold_1090_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27682..28224)
DNA (543bp) protein (181aa)
tal; transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Transaldolase n=7 Tax=Bifidobacterium RepID=D6ZUG3_BIFLJ
Displaying 24 items

View Taxonomy