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L1_008_364G1_scaffold_1258

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_1258_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..240)
DNA (240bp) protein (80aa)
Ferric uptake regulator, Fur family n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUA0_BIFLS
Ferric uptake regulation protein
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EEI81154.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_364G1_scaffold_1258_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(249..1238)
DNA (990bp) protein (330aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A3T0_BIFBR
Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit
L1_008_364G1_scaffold_1258_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1222..1656)
DNA (435bp) protein (145aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BN30_BIFBR
Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit
L1_008_364G1_scaffold_1258_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1723..2715)
DNA (993bp) protein (331aa)
GroES-like protein n=3 Tax=Bifidobacterium breve RepID=D4BN29_BIFBR
Alcohol dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EPD76880.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_1258_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2969..5074
DNA (2106bp) protein (702aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0B5_BIFBR
1-deoxy-D-xylulose 5-phosphate synthase
L1_008_364G1_scaffold_1258_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5058..6587)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJC8_BIFBR
Permease protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:BAQ99529.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_364G1_scaffold_1258_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6599..7894)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S3A3S3_BIFBR
putative membrane spanning protein, possibly ABC-type permease
Putative membrane spanning protein, possibly ABC-type permease {ECO:0000313|EMBL:AHJ20739.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_1258_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7906..8718)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZKG3_BIFBR
ATP-binding protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:EPD76876.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_1258_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9413..9904)
DNA (492bp) protein (164aa)
Peptide methionine sulfoxide reductase msrA/msrB n=2 Tax=Bifidobacterium breve RepID=F9Y2F7_BIFBU
Peptide methionine sulfoxide reductase msrA/msrB
Peptide-methionine (S)-S-oxide reductase {ECO:0000313|EMBL:EPD76875.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_1258_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9906..11525)
DNA (1620bp) protein (540aa)
Solute-binding protein of ABC transporter system for peptides n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2F6_BIFBU
dppA1; Solute-binding protein of ABC transporter system for peptides
Solute-binding protein of ABC transporter system for peptides {ECO:0000313|EMBL:ABE95256.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_1258_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11628..11834)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJC3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89058.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
transposase
L1_008_364G1_scaffold_1258_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12039..13259)
DNA (1221bp) protein (407aa)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium breve RepID=F6C5K0_BIFBA
Alpha-glucosidase
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:ERI87924.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Displaying 12 items

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