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L1_008_364G1_scaffold_1294

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_1294_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1126)
DNA (1125bp) protein (375aa)
aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U639_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_364G1_scaffold_1294_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1351..2442
DNA (1092bp) protein (364aa)
Endonuclease/exonuclease/phosphatase family protein n=3 Tax=Lachnospiraceae RepID=A7B8E7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15692.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Endonuclease/Exonuclease/phosphatase family.
L1_008_364G1_scaffold_1294_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2488..3711)
DNA (1224bp) protein (408aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Clostridiales RepID=A7B8E8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15691.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L1_008_364G1_scaffold_1294_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3860..4978)
DNA (1119bp) protein (373aa)
Carboxynorspermidine decarboxylase n=2 Tax=Clostridiales RepID=A7B8F0_RUMGN
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CCZ66624.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
carboxynorspermidine decarboxylase
L1_008_364G1_scaffold_1294_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4995..6197)
DNA (1203bp) protein (401aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=3 Tax=Lachnospiraceae RepID=A7B8F1_RUMGN
Saccharopine dehydrogenase {ECO:0000313|EMBL:EGN44442.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_364G1_scaffold_1294_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6232..7089)
DNA (858bp) protein (286aa)
Agmatinase {ECO:0000313|EMBL:EDN75782.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EDN75782.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
speB; agmatinase SpeB (EC:3.5.3.11)
Agmatinase n=4 Tax=Clostridiales RepID=A7B8F2_RUMGN
L1_008_364G1_scaffold_1294_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7079..7930)
DNA (852bp) protein (284aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=4 Tax=Clostridiales RepID=A7B8F3_RUMGN
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_364G1_scaffold_1294_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7945..9393)
DNA (1449bp) protein (483aa)
Orn/Lys/Arg decarboxylase, major domain protein n=4 Tax=Clostridiales RepID=A7B8F4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44445.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Orn/Lys/Arg decarboxylase major region
L1_008_364G1_scaffold_1294_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9974..10315)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66629.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_364G1_scaffold_1294_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10394..10723)
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BKM8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44447.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_364G1_scaffold_1294_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10678..10902)
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B8F7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44448.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_364G1_scaffold_1294_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10899..11213)
DNA (315bp) protein (105aa)
Transcriptional regulator, PadR family n=4 Tax=Clostridiales RepID=A7B8F8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44449.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PadR family transcriptional regulator
L1_008_364G1_scaffold_1294_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11517..11759
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B8G0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN75790.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein (putative transposase or invertase)
L1_008_364G1_scaffold_1294_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11955..13328)
DNA (1374bp) protein (458aa)
Pyridine nucleotide-disulfide oxidoreductase n=4 Tax=Clostridiales RepID=A7B8G1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15680.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uncharacterized FAD-dependent dehydrogenases
L1_008_364G1_scaffold_1294_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13416..15074)
DNA (1659bp) protein (553aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8G2_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN75792.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATP-binding cassette subfamily C protein
L1_008_364G1_scaffold_1294_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15071..16804)
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B8G3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44453.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
L1_008_364G1_scaffold_1294_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16797..17174)
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B8G4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44454.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Nitrous oxide-stimulated promoter.
L1_008_364G1_scaffold_1294_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17175..17561)
DNA (387bp) protein (129aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B8G5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN75795.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L1_008_364G1_scaffold_1294_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17777..18697
DNA (921bp) protein (307aa)
CAAX amino terminal protease family protein n=4 Tax=Clostridiales RepID=A7B8G6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44456.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_364G1_scaffold_1294_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18684..20675)
DNA (1992bp) protein (664aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44457.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Displaying 20 items

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