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L1_008_364G1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_16_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..134
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=T5LQT1_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:EDS19112.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Lycopene beta/epsilon cyclase family protein
L1_008_364G1_scaffold_16_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(185..1744)
DNA (1560bp) protein (520aa)
Chloride transporter, ClC family n=4 Tax=Erysipelotrichaceae RepID=B0N3U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36635.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Group I intron
L1_008_364G1_scaffold_16_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1870..2325
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N3U2_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ36634.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hpr; HTH-type transcriptional regulator Hpr
L1_008_364G1_scaffold_16_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2499..3128)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91597.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
comFC; putative competence protein ComFC
L1_008_364G1_scaffold_16_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3095..4198)
DNA (1104bp) protein (368aa)
Helicase C-terminal domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N3U4_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EDS19116.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L1_008_364G1_scaffold_16_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4469..4666
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47925.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cold-shock DNA-binding domain-containing protein
L1_008_364G1_scaffold_16_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4766..7399
DNA (2634bp) protein (878aa)
Protein translocase subunit SecA n=5 Tax=Erysipelotrichaceae RepID=B0N3U6_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
secA1; Protein translocase subunit SecA 1
L1_008_364G1_scaffold_16_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7399..8496
DNA (1098bp) protein (366aa)
Peptide chain release factor 2 n=5 Tax=Erysipelotrichaceae RepID=B0N3U7_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
prfB; peptide chain release factor 2, programmed frameshift
L1_008_364G1_scaffold_16_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8510..9367
DNA (858bp) protein (286aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G9R1H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36627.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_364G1_scaffold_16_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9412..9627)
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36626.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_364G1_scaffold_16_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9814..10497
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=4 Tax=Erysipelotrichaceae RepID=B0N3V0_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHQ47930.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cell division ATP-binding protein FtsE
L1_008_364G1_scaffold_16_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10497..11408
DNA (912bp) protein (304aa)
Cell division protein FtsX n=2 Tax=Erysipelotrichaceae RepID=B0N3V1_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ftsX; cell division protein
L1_008_364G1_scaffold_16_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11448..12137
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47932.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
GCN5-like N-acetyltransferase
L1_008_364G1_scaffold_16_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12153..13523
DNA (1371bp) protein (457aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47933.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
transglutaminase
L1_008_364G1_scaffold_16_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13586..13837
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36622.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_364G1_scaffold_16_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13979..15736)
DNA (1758bp) protein (586aa)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N3V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47935.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_364G1_scaffold_16_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15854..16684
DNA (831bp) protein (277aa)
Transcriptional regulator, MerR family n=4 Tax=Erysipelotrichaceae RepID=B0N3V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47936.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_008_364G1_scaffold_16_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16757..17794
DNA (1038bp) protein (346aa)
Dihydrodipicolinate reductase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91611.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
dihydrodipicolinate reductase
L1_008_364G1_scaffold_16_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17900..18217
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=5 Tax=Erysipelotrichaceae RepID=B0N3V8_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCZ36618.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative transcriptional regulator
L1_008_364G1_scaffold_16_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18573..19865
DNA (1293bp) protein (431aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R1I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36617.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_364G1_scaffold_16_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20204..20338
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36616.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_364G1_scaffold_16_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20335..20616
DNA (282bp) protein (94aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36615.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_364G1_scaffold_16_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20580..20789
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91616.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Mn-containing catalase
L1_008_364G1_scaffold_16_24
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20811..22331)
DNA (1521bp) protein (507aa)
Recombinase n=1 Tax=Clostridium sp. CAG:798 RepID=R6XL45_9CLOT
Recombinase {ECO:0000313|EMBL:CDD16991.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
resolvase
L1_008_364G1_scaffold_16_25
unknown

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comp(22369..22587)
DNA (219bp) protein (73aa)

This feature has no annotations

L1_008_364G1_scaffold_16_26
unknown

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comp(22595..23020)
DNA (426bp) protein (142aa)

This feature has no annotations

L1_008_364G1_scaffold_16_27
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(23154..23588)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E8S6_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04123.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_364G1_scaffold_16_28
unknown

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comp(23608..23838)
DNA (231bp) protein (77aa)

This feature has no annotations

L1_008_364G1_scaffold_16_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(23839..24264)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46184.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
putative immunity region protein 2
L1_008_364G1_scaffold_16_30
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24295..25185)
DNA (891bp) protein (297aa)
Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N2H4_CLOK5
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:BAH07976.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
Displaying items 1-30 of 194 in total

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