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L1_008_364G1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_85_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..477)
DNA (477bp) protein (159aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transaldolase, putative, TalC family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ALG8_9FIRM
L1_008_364G1_scaffold_85_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(491..2518)
DNA (2028bp) protein (676aa)
PRD domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N881_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93820.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcription antiterminator
L1_008_364G1_scaffold_85_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2534..3589)
DNA (1056bp) protein (352aa)
Phosphotransferase system, EIIC n=3 Tax=Erysipelotrichaceae RepID=B0N882_9FIRM
PTS system, Fru family, IIC component {ECO:0000313|EMBL:EHM93819.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system fructose subfamily transporter subunit IIC
L1_008_364G1_scaffold_85_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3601..3915)
DNA (315bp) protein (105aa)
Fructose-like phosphotransferase enzyme IIB component 2 {ECO:0000313|EMBL:EDS18021.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS18021.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Fructose-like phosphotransferase enzyme IIB component 2 n=3 Tax=Erysipelotrichaceae RepID=B0N883_9FIRM
PTS system, fructose-specific, IIB subunit
L1_008_364G1_scaffold_85_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3928..4395)
DNA (468bp) protein (156aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Erysipelotrichaceae RepID=B0N884_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EDS18022.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2
L1_008_364G1_scaffold_85_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4401..5669)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N885_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18023.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L1_008_364G1_scaffold_85_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5944..7341)
DNA (1398bp) protein (466aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N886_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33438.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ROK family protein
L1_008_364G1_scaffold_85_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7595..8083)
DNA (489bp) protein (163aa)
bglF.4; PTS system beta-glucosides-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, glucose subfamily, IIA component n=2 Tax=Coprobacillus RepID=G9QXK1_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHM93814.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_364G1_scaffold_85_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8104..9513)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QXK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93813.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system beta-glucoside-specific transporter subunit IIABC
L1_008_364G1_scaffold_85_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9525..10364)
DNA (840bp) protein (280aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RHS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33447.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
licT; BglG family transcriptional antiterminator
L1_008_364G1_scaffold_85_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10384..11832)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHS4_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS18028.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycosyl hydrolase family protein
L1_008_364G1_scaffold_85_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12261..12497)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=T5LEV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93810.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_364G1_scaffold_85_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12509..12679)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N893_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18031.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_364G1_scaffold_85_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12852..12959)
DNA (108bp) protein (36aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N894_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33464.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_364G1_scaffold_85_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13095..14231)
DNA (1137bp) protein (379aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=4 Tax=Coprobacillus RepID=C3RHS0_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ33466.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L1_008_364G1_scaffold_85_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14351..14845)
DNA (495bp) protein (165aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RHR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33468.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_364G1_scaffold_85_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14858..15838)
DNA (981bp) protein (327aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N897_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46053.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
MviM protein
L1_008_364G1_scaffold_85_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15839..16780)
DNA (942bp) protein (314aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N898_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33476.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Predicted dehydrogenases and related proteins
L1_008_364G1_scaffold_85_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16916..17644)
DNA (729bp) protein (243aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9QXJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33478.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_008_364G1_scaffold_85_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17854..18894
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QXJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93803.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Putative GTPases (G3E family)
L1_008_364G1_scaffold_85_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18894..19835
DNA (942bp) protein (314aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9QXI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46057.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
G3E family GTPase-like protein
L1_008_364G1_scaffold_85_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19879..20181)
DNA (303bp) protein (101aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33485.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L1_008_364G1_scaffold_85_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20181..21413)
DNA (1233bp) protein (411aa)
PTS system, lactose/cellobiose family IIC subunit (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QXI7_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_364G1_scaffold_85_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21426..23420)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QXI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93799.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
NADH:flavin oxidoreductase
L1_008_364G1_scaffold_85_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23567..25468
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46061.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
HTH domain protein
L1_008_364G1_scaffold_85_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25501..26196)
DNA (696bp) protein (232aa)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QXI4_9FIRM
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EHM93797.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
biotin-[acetyl-CoA-carboxylase] ligase
L1_008_364G1_scaffold_85_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26268..28940)
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46063.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
type III restriction endonuclease subunit R
L1_008_364G1_scaffold_85_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29071..29949
DNA (879bp) protein (293aa)
Transcriptional regulator, AraC family n=5 Tax=Erysipelotrichaceae RepID=B0N8A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33495.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator, AraC family
L1_008_364G1_scaffold_85_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30035..31990
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RKT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33497.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L1_008_364G1_scaffold_85_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32007..33932
DNA (1926bp) protein (642aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N8B1_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDS18049.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
Displaying items 1-30 of 78 in total

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