ggKbase home page

L1_008_364G1_scaffold_526

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_526_1
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..584
DNA (582bp) protein (194aa)
Lipid II flippase FtsW n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF28_9PAST
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
ftsW; cell division membrane protein
L1_008_364G1_scaffold_526_2
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

723..1778
DNA (1056bp) protein (352aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NFA4_9PAST
L1_008_364G1_scaffold_526_3
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1794..3221
DNA (1428bp) protein (476aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF16_9PAST
murC; UDP-N-acetylmuramate--L-alanine ligase
L1_008_364G1_scaffold_526_4
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3348..4259
DNA (912bp) protein (304aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
D-alanine--D-alanine ligase n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF64_9PAST
D-alanine--D-alanine ligase
L1_008_364G1_scaffold_526_5
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4259..5059
DNA (801bp) protein (267aa)
Cell division protein FtsQ n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF34_9PAST
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
cell division protein FtsQ
L1_008_364G1_scaffold_526_6
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5086..6369
DNA (1284bp) protein (428aa)
Cell division protein ftsA n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NFA7_9PAST
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
ftsA; cell division protein FtsA
L1_008_364G1_scaffold_526_7
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6418..7647
DNA (1230bp) protein (410aa)
Cell division protein FtsZ n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NEW7_9PAST
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
ftsZ; cell division protein FtsZ
L1_008_364G1_scaffold_526_8
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7674..8594
DNA (921bp) protein (307aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF17_9PAST
L1_008_364G1_scaffold_526_9
Haemophilus parahaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8764..9366
DNA (603bp) protein (201aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1095744 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parahaemolyticus HK385.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Haemophilus parahaemolyticus HK385 RepID=I3D955_HAEPH
FKBP-type peptidyl-prolyl cis-trans isomerase slyD
L1_008_364G1_scaffold_526_10
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9490..11016
DNA (1527bp) protein (509aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
Threonine ammonia-lyase, biosynthetic n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NEY3_9PAST
Threonine dehydratase biosynthetic
L1_008_364G1_scaffold_526_11
Haemophilus parahaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11026..12357
DNA (1332bp) protein (444aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1095744 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parahaemolyticus HK385.;"
Phosphoglucosamine mutase n=1 Tax=Haemophilus parahaemolyticus HK385 RepID=I3D905_HAEPH
Phosphoglucosamine mutase 1
L1_008_364G1_scaffold_526_12
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12420..13118)
DNA (699bp) protein (233aa)
FtsZ family, C-terminal domain protein n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF74_9PAST
FtsZ family, C-terminal domain protein {ECO:0000313|EMBL:EIG24485.1}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
L1_008_364G1_scaffold_526_13
Haemophilus parahaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13208..14587)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1095744 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parahaemolyticus HK385.;"
GHKL domain protein n=1 Tax=Haemophilus parahaemolyticus HK385 RepID=I3D951_HAEPH
histidine kinase
L1_008_364G1_scaffold_526_14
Haemophilus parahaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14696..15361)
DNA (666bp) protein (222aa)
Response regulator receiver domain protein n=1 Tax=Haemophilus parahaemolyticus HK385 RepID=I3D909_HAEPH
Response regulator receiver domain protein {ECO:0000313|EMBL:EIJ68202.1}; TaxID=1095744 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parahaemolyticus HK385.;"
XRE family transcriptional regulator
L1_008_364G1_scaffold_526_15
Haemophilus parahaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15453..16076)
DNA (624bp) protein (208aa)
Peptidase propeptide and YpeB domain protein n=1 Tax=Haemophilus parahaemolyticus HK385 RepID=I3D930_HAEPH
Peptidase propeptide and YpeB domain protein {ECO:0000313|EMBL:EIJ68223.1}; TaxID=1095744 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parahaemolyticus HK385.;"
L1_008_364G1_scaffold_526_16
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16332..16991
DNA (660bp) protein (220aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF29_9PAST
L1_008_364G1_scaffold_526_17
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17076..18305
DNA (1230bp) protein (410aa)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EIG24443.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EIG24443.1};; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF32_9PAST
L1_008_364G1_scaffold_526_18
Haemophilus parahaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18642..20150
DNA (1509bp) protein (503aa)
Transporter n=1 Tax=Haemophilus parahaemolyticus HK385 RepID=I3D950_HAEPH
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1095744 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parahaemolyticus HK385.;"
transporter
L1_008_364G1_scaffold_526_19
Pasteurella multocida, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20152..20244
DNA (93bp) protein (31aa)
Uncharacterized protein n=13 Tax=Pasteurella multocida RepID=H8IC60_PASMH
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EJS89059.1}; TaxID=1032868 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella.;" source="Pasteurella multocida subsp. multocida str. Anand1_buffalo.;"
L1_008_364G1_scaffold_526_20
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20297..21103)
DNA (807bp) protein (269aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
Methionine aminopeptidase n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF24_9PAST
map; methionine aminopeptidase
L1_008_364G1_scaffold_526_21
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21356..24613)
DNA (3258bp) protein (1086aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus paraphrohaemolyticus HK411.;"
rpoC; DNA-directed RNA polymerase, subunit beta' RpoC (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF86_9PAST
Displaying 21 items

View Taxonomy