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L1_008_364G1_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_290_1
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(39..314)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=root RepID=H1B701_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31372.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L1_008_364G1_scaffold_290_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(327..1253)
DNA (927bp) protein (309aa)
ParB-like partition protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X3L2_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:EHO31371.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
parB-like partition protein
L1_008_364G1_scaffold_290_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1210..2031)
DNA (822bp) protein (274aa)
ATPases involved in chromosome partitioning n=1 Tax=Ruminococcus torques L2-14 RepID=D4M224_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL25286.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_364G1_scaffold_290_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2151..3848)
DNA (1698bp) protein (566aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9H7_9FIRM
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CDA25437.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_290_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3927..4871)
DNA (945bp) protein (315aa)
Uncharacterized domain HDIG n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVF6_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDA25436.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
uncharacterized domain HDIG
L1_008_364G1_scaffold_290_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4883..6160)
DNA (1278bp) protein (426aa)
HtrA-like serine protease (With PDZ domain) n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEZ2_9FIRM
HtrA-like serine protease (With PDZ domain) {ECO:0000313|EMBL:CDA25435.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
HtrA-like serine protease (with PDZ domain)
L1_008_364G1_scaffold_290_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6331..8715
DNA (2385bp) protein (795aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Endonuclease MutS2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V809_9FIRM
DNA mismatch repair protein
L1_008_364G1_scaffold_290_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8730..9428
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YD19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25433.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_364G1_scaffold_290_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9425..10861
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9H2_9FIRM
Signal transduction histidine kinase
L1_008_364G1_scaffold_290_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10890..11909)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25431.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_290_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11922..13724)
DNA (1803bp) protein (601aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEY7_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDA25430.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_290_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13775..15034)
DNA (1260bp) protein (420aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YL97_9FIRM
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CDA25429.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_290_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15204..16013)
DNA (810bp) protein (270aa)
Arginase family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YD13_9FIRM
Arginase family {ECO:0000313|EMBL:CDA25428.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Arginase family.
L1_008_364G1_scaffold_290_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16050..17564)
DNA (1515bp) protein (505aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9G6_9FIRM
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases {ECO:0000313|EMBL:CDA25427.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_290_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17561..18190)
DNA (630bp) protein (210aa)
Hydroxyacylglutathione hydrolase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVE3_9FIRM
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:CDA25426.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hydroxyacylglutathione hydrolase
L1_008_364G1_scaffold_290_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18247..20586)
DNA (2340bp) protein (780aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEY3_9FIRM
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:CDA25425.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
(p)ppGpp synthetase I, SpoT/RelA
L1_008_364G1_scaffold_290_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20686..21579)
DNA (894bp) protein (298aa)
Acetyltransferase GNAT family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YL89_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA25424.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
guanosine monophosphate synthetase GuaA
L1_008_364G1_scaffold_290_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21683..22204)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YD07_9FIRM
L1_008_364G1_scaffold_290_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22258..23697)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9G1_9FIRM
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
L1_008_364G1_scaffold_290_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23700..24755)
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVD6_9FIRM
L1_008_364G1_scaffold_290_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25051..25338)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25420.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_290_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25565..26095)
DNA (531bp) protein (177aa)
Ribosome-associated protein Y (PSrp-1) n=1 Tax=Roseburia sp. CAG:197 RepID=R5YL82_9FIRM
Ribosome-associated protein Y (PSrp-1) {ECO:0000313|EMBL:CDA25419.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
SSU ribosomal protein S30P/sigma 54 modulation protein
L1_008_364G1_scaffold_290_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26236..27135)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YD01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25418.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_290_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27132..27614)
DNA (483bp) protein (161aa)
RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9F5_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CDA25417.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_008_364G1_scaffold_290_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27749..28486)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79768.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
zinc finger, SWIM-type
L1_008_364G1_scaffold_290_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28492..31065)
DNA (2574bp) protein (858aa)
non-specific serine/threonine protein kinase (EC:2.7.11.1)
Helicase SNF2/RAD54 family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG85_9FIRM
Helicase SNF2/RAD54 family {ECO:0000313|EMBL:CCZ79767.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_008_364G1_scaffold_290_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31062..32633)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79766.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_008_364G1_scaffold_290_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32717..35020)
DNA (2304bp) protein (768aa)
von Willebrand factor type A domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEX5_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDA25415.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
von Willebrand factor type A domain-containing protein
L1_008_364G1_scaffold_290_29
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35402..36340
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25413.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_290_30
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36410..36700)
DNA (291bp) protein (97aa)
Putative helix-turn-helix protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9F0_9FIRM
Putative helix-turn-helix protein {ECO:0000313|EMBL:CDA25412.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Helix-turn-helix.
Displaying items 1-30 of 31 in total

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