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L1_008_364G1_scaffold_294

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_294_1
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(236..1087)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V9I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93820.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L1_008_364G1_scaffold_294_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1301..2476
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YN54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA26064.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted xylanase/chitin deacetylase
L1_008_364G1_scaffold_294_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2590..3150
DNA (561bp) protein (187aa)
Ig domain protein group 2 domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YF33_9FIRM
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDA26063.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_294_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3300..5285
DNA (1986bp) protein (662aa)
UvrABC system protein B n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZB95_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
excinuclease ABC, B subunit
L1_008_364G1_scaffold_294_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5321..8158
DNA (2838bp) protein (946aa)
UvrABC system protein A n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8X0_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
excinuclease ABC, A subunit
L1_008_364G1_scaffold_294_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8418..9413
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YX58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA26146.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
rod shape-determining protein MreB
L1_008_364G1_scaffold_294_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9545..10348
DNA (804bp) protein (268aa)
Flagellar basal body and hook protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGW7_9FIRM
Flagellar basal body and hook protein {ECO:0000313|EMBL:CDA26145.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
fagellar hook-basal body proteins
L1_008_364G1_scaffold_294_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10392..11213
DNA (822bp) protein (274aa)
Fagellar hook-basal body proteins n=1 Tax=Roseburia sp. CAG:197 RepID=R5YNB5_9FIRM
Fagellar hook-basal body proteins {ECO:0000313|EMBL:CDA26144.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
fagellar hook-basal body proteins
L1_008_364G1_scaffold_294_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11292..11654
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YF78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA26143.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_294_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11800..14037
DNA (2238bp) protein (746aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Helicase RecD/TraA family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8X4_9FIRM
helicase, RecD/TraA family
L1_008_364G1_scaffold_294_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14113..14688
DNA (576bp) protein (192aa)
Acetyltransferases n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFN6_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CDA25690.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Acetyltransferases
L1_008_364G1_scaffold_294_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14927..16000
DNA (1074bp) protein (358aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Roseburia sp. CAG:197 RepID=R5YW28_9FIRM
carbamoyl phosphate synthase small subunit
L1_008_364G1_scaffold_294_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16021..19227
DNA (3207bp) protein (1069aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA72_9FIRM
L1_008_364G1_scaffold_294_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19377..20441
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25693.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_294_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20438..21142
DNA (705bp) protein (235aa)
Phosphatidylserine synthase (EC:2.7.8.8)
CDP-alcohol phosphatidyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YM20_9FIRM
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CDA25694.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_294_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21152..21970
DNA (819bp) protein (273aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFP2_9FIRM
L1_008_364G1_scaffold_294_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21954..22595
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YW31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25696.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
PAP2 superfamily.
L1_008_364G1_scaffold_294_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22602..23774)
DNA (1173bp) protein (391aa)
HD-GYP domain n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZA75_9FIRM
HD-GYP domain {ECO:0000313|EMBL:CDA25697.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
HD-GYP domain
L1_008_364G1_scaffold_294_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24030..25214
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF04_9FIRM
Acetyl-CoA acetyltransferases {ECO:0000313|EMBL:CCZ79317.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
acetyl-CoA acetyltransferase
L1_008_364G1_scaffold_294_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25297..26169
DNA (873bp) protein (291aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V775_9FIRM
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:CCZ79316.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-hydroxybutyryl-CoA dehydrogenase
L1_008_364G1_scaffold_294_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26215..27369
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenases (EC:1.3.8.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79315.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_008_364G1_scaffold_294_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27421..28203
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=root RepID=R5UUC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79314.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Electron transfer flavoprotein, beta subunit
L1_008_364G1_scaffold_294_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28221..29279
DNA (1059bp) protein (353aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULX9_9FIRM
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:CCZ79313.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Electron transfer flavoprotein, alpha subunit
L1_008_364G1_scaffold_294_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29445..29813
DNA (369bp) protein (123aa)
Putative BlaI family transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEZ9_9FIRM
Putative BlaI family transcriptional regulator {ECO:0000313|EMBL:CCZ79312.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator
L1_008_364G1_scaffold_294_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29806..31257
DNA (1452bp) protein (484aa)
Peptidase M56 BlaR1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V769_9FIRM
Peptidase M56 BlaR1 {ECO:0000313|EMBL:CCZ79311.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptidase M56 BlaR1
L1_008_364G1_scaffold_294_26

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31586..32128
DNA (543bp) protein (181aa)
Protein containing RNA polymerase sigma factor 70, region 4 type 2 domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TAJ6_9ZZZZ
Protein containing RNA polymerase sigma factor 70, region 4 type 2 domain protein {ECO:0000313|EMBL:EKC70187.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ECF family RNA polymerase sigma-24 subunit
L1_008_364G1_scaffold_294_27
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32125..32796
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SWI9_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55755.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L1_008_364G1_scaffold_294_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32809..33315
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VM53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY91715.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_008_364G1_scaffold_294_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33441..34262
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79310.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted membrane protein
L1_008_364G1_scaffold_294_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34395..34832
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79309.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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