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L1_008_364G1_scaffold_413

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_413_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(216..1427)
DNA (1212bp) protein (404aa)
Uncharacterized conserved protein related to MYG1 family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRH8_9FIRM
Uncharacterized conserved protein related to MYG1 family {ECO:0000313|EMBL:CDA24031.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Uncharacterized conserved protein related to MYG1 family
L1_008_364G1_scaffold_413_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1438..1818)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24032.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_413_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1922..3937)
DNA (2016bp) protein (672aa)
Predicted permease n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9C0_9FIRM
Predicted permease {ECO:0000313|EMBL:CDA24033.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_413_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3930..4697)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YH48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24034.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_008_364G1_scaffold_413_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4828..5925)
DNA (1098bp) protein (366aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YB23_9FIRM
Signal transduction histidine kinase
L1_008_364G1_scaffold_413_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5922..6593)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24036.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_413_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6626..8773)
DNA (2148bp) protein (716aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9N5_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA24173.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Signal transduction histidine kinase
L1_008_364G1_scaffold_413_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8777..9559)
DNA (783bp) protein (261aa)
Amino acid ABC transporter substrate-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHF3_9FIRM
Amino acid ABC transporter substrate-binding protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CDA24174.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_008_364G1_scaffold_413_9
Bacillus manliponensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9760..10860)
DNA (1101bp) protein (367aa)
sodium export permease n=1 Tax=Bacillus cereus RepID=UPI00034AC8DD
Sodium export permease {ECO:0000313|EMBL:KEK17805.1}; TaxID=574376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus manliponensis.;"
hypothetical protein
L1_008_364G1_scaffold_413_10
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10864..11721)
DNA (858bp) protein (286aa)
ABC transporter related protein n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MTH0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHS55804.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
ABC transporter family protein
L1_008_364G1_scaffold_413_11
unknown

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comp(11718..11891)
DNA (174bp) protein (58aa)

This feature has no annotations

L1_008_364G1_scaffold_413_12
unknown

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comp(11884..12126)
DNA (243bp) protein (81aa)

This feature has no annotations

L1_008_364G1_scaffold_413_13
unknown

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comp(12131..12526)
DNA (396bp) protein (132aa)

This feature has no annotations

L1_008_364G1_scaffold_413_14
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12599..13972)
DNA (1374bp) protein (458aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIR4_CLOPH
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ABX43927.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_364G1_scaffold_413_15
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13985..15004)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIR5_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43928.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_364G1_scaffold_413_16
unknown

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comp(15078..15188)
DNA (111bp) protein (37aa)

This feature has no annotations

L1_008_364G1_scaffold_413_17
unknown

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comp(15212..15319)
DNA (108bp) protein (36aa)

This feature has no annotations

L1_008_364G1_scaffold_413_18
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15883..17223)
DNA (1341bp) protein (447aa)
Histidine kinase-like protein n=1 Tax=Butyrivibrio fibrisolvens RepID=Q9ZGP9_BUTFI
Histidine kinase-like protein {ECO:0000313|EMBL:AAC69556.1}; TaxID=831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens.;"
hypothetical protein
L1_008_364G1_scaffold_413_19
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17228..17944)
DNA (717bp) protein (239aa)
Response regulator-like protein n=1 Tax=Butyrivibrio fibrisolvens RepID=Q9ZGQ0_BUTFI
Response regulator-like protein {ECO:0000313|EMBL:AAC69555.2}; TaxID=831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens.;"
two component transcriptional regulator, LytTR family
L1_008_364G1_scaffold_413_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18301..19731)
DNA (1431bp) protein (477aa)
Sodium/alanine symporter n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBC2_9FIRM
Sodium/alanine symporter {ECO:0000313|EMBL:CDA24175.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
sodium/alanine symporter
L1_008_364G1_scaffold_413_21
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20193..22046)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24176.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_364G1_scaffold_413_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22036..24339)
DNA (2304bp) protein (768aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24177.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_364G1_scaffold_413_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24353..24829)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24178.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Transcriptional regulators
L1_008_364G1_scaffold_413_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24952..25950)
DNA (999bp) protein (333aa)
Predicted membrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHF6_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDA24179.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted membrane protein
L1_008_364G1_scaffold_413_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25956..26582)
DNA (627bp) protein (209aa)
L(+)-tartrate dehydratase subunit beta n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBC4_9FIRM
L(+)-tartrate dehydratase subunit beta {ECO:0000313|EMBL:CDA24180.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L(+)-tartrate dehydratase subunit beta
L1_008_364G1_scaffold_413_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26582..27481)
DNA (900bp) protein (300aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.32)
Tartrate dehydratase subunit alpha n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRU2_9FIRM
Tartrate dehydratase subunit alpha {ECO:0000313|EMBL:CDA24181.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_413_27
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27531..28796)
DNA (1266bp) protein (422aa)
Transporter DASS family n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5T6_9FIRM
Transporter DASS family {ECO:0000313|EMBL:CDA24182.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
citrate transporter
L1_008_364G1_scaffold_413_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28975..29394)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24183.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
transcriptional regulator, GntR family
Displaying 28 items

View Taxonomy