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L1_008_364G1_scaffold_567

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_567_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(693..1412)
DNA (720bp) protein (240aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z4N9_9FIRM
L1_008_364G1_scaffold_567_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1413..2432)
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y8K3_9FIRM
L1_008_364G1_scaffold_567_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2475..3068)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23789.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_567_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3071..3982)
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV94_9FIRM
L1_008_364G1_scaffold_567_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4014..4445)
DNA (432bp) protein (144aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAC3_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDA23855.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_567_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4442..5155)
DNA (714bp) protein (238aa)
Inactive homolog of metal-dependent proteases putative molecular chaperone n=1 Tax=Roseburia sp. CAG:197 RepID=R5YQY6_9FIRM
Inactive homolog of metal-dependent proteases putative molecular chaperone {ECO:0000313|EMBL:CDA23856.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L1_008_364G1_scaffold_567_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5175..5621)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z4V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23857.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_567_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5637..6137)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y8S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23858.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_567_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6306..6962)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGI2_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_567_10
unknown

Not on your lists

comp(6988..7251)
DNA (264bp) protein (88aa)

This feature has no annotations

L1_008_364G1_scaffold_567_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7325..9466)
DNA (2142bp) protein (714aa)
Transcriptional accessory protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAC9_9FIRM
Transcriptional accessory protein {ECO:0000313|EMBL:CDA23860.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Transcriptional accessory protein
L1_008_364G1_scaffold_567_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9552..9920
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YQZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23861.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_567_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10404..11159
DNA (756bp) protein (252aa)
Predicted integral membrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y8S5_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CDA23863.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted integral membrane protein
L1_008_364G1_scaffold_567_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11189..12601
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23864.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
uracil permease
L1_008_364G1_scaffold_567_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12662..14629)
DNA (1968bp) protein (656aa)
Myosin-crossreactive antigen n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPG6_9FIRM
Myosin-crossreactive antigen {ECO:0000313|EMBL:CCZ77669.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Myosin-crossreactive antigen
L1_008_364G1_scaffold_567_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14860..15417)
DNA (558bp) protein (186aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCI4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ78482.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator
L1_008_364G1_scaffold_567_17
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15654..15944)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B69DA6
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03552.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L1_008_364G1_scaffold_567_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16083..16946)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78481.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_008_364G1_scaffold_567_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17072..17614)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78480.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein conserved in cyanobacteria
L1_008_364G1_scaffold_567_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17799..18494)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5URW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78479.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L-ribulose-5-phosphate 4-epimerase
L1_008_364G1_scaffold_567_21
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18585..20174)
DNA (1590bp) protein (530aa)
Carbohydrate kinase n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYS6_9FIRM
Carbohydrate kinase {ECO:0000313|EMBL:CDF42596.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Sugar (pentulose and hexulose) kinases
L1_008_364G1_scaffold_567_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20244..21740)
DNA (1497bp) protein (499aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCH9_9FIRM
L1_008_364G1_scaffold_567_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21808..22818)
DNA (1011bp) protein (337aa)
Transcriptional regulator GntR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4V5_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ78476.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LacI family transcriptional regulator
L1_008_364G1_scaffold_567_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23024..23587)
DNA (564bp) protein (188aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase prokaryotic n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEZ4_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase prokaryotic {ECO:0000313|EMBL:CCZ79307.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Displaying 24 items

View Taxonomy