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L1_008_364G1_scaffold_606

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_606_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55..228)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24560.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_606_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(231..791)
DNA (561bp) protein (187aa)
Sigma-70 region 2 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YSZ6_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CDA24561.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
RNA polymerase sigma-70 factor
L1_008_364G1_scaffold_606_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1112..1435)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z6Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24562.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_606_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1583..2065
DNA (483bp) protein (161aa)
Sigma-70 region 2 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAP9_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CDA24563.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative RNA polymerase ECF subfamily sigma factor
L1_008_364G1_scaffold_606_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2055..2642
DNA (588bp) protein (196aa)
Tat pathway signal sequence domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIL5_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA24564.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_606_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2739..3611
DNA (873bp) protein (291aa)
Membrane associated protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCG2_9FIRM
Membrane associated protein {ECO:0000313|EMBL:CDA24565.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
membrane associated protein
L1_008_364G1_scaffold_606_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3758..3862
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YT00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24566.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_606_8
unknown

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3933..4460
DNA (528bp) protein (176aa)

This feature has no annotations

L1_008_364G1_scaffold_606_9
unknown

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4465..4884
DNA (420bp) protein (140aa)

This feature has no annotations

L1_008_364G1_scaffold_606_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4976..5494
DNA (519bp) protein (173aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEN4_9FIRM
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDA25928.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_008_364G1_scaffold_606_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5491..6627
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25927.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_606_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6659..6862
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25926.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_606_13
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7054..7332)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WAX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92916.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Predicted membrane protein
L1_008_364G1_scaffold_606_14
unknown

Not on your lists

comp(7301..7552)
DNA (252bp) protein (84aa)

This feature has no annotations

L1_008_364G1_scaffold_606_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7549..7992)
DNA (444bp) protein (148aa)
Transcriptional regulators n=1 Tax=Clostridium sp. CAG:277 RepID=R7JWY5_9CLOT
Transcriptional regulators {ECO:0000313|EMBL:CDE68166.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Transcriptional regulators
L1_008_364G1_scaffold_606_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8155..10146
DNA (1992bp) protein (664aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGK4_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBK92488.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_364G1_scaffold_606_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10433..11428
DNA (996bp) protein (332aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGK5_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBK92489.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_364G1_scaffold_606_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11444..12943
DNA (1500bp) protein (500aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716, ECO:0000313|EMBL:CBK92490.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGK6_9FIRM
L1_008_364G1_scaffold_606_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12945..13958
DNA (1014bp) protein (338aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGK7_9FIRM
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBK92491.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_364G1_scaffold_606_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14009..15487
DNA (1479bp) protein (493aa)
Beta-fructosidases (Levanase/invertase) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGK8_9FIRM
Beta-fructosidases (levanase/invertase)
Beta-fructosidases (Levanase/invertase) {ECO:0000313|EMBL:CBK92492.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_364G1_scaffold_606_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15507..16490
DNA (984bp) protein (328aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBK92493.1}; EC=2.7.1.4 {ECO:0000313|EMBL:CBK92493.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Sugar kinases, ribokinase family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGK9_9FIRM
L1_008_364G1_scaffold_606_22
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16689..17069
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I2W9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE45811.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L1_008_364G1_scaffold_606_23
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17074..18720
DNA (1647bp) protein (549aa)
Peptidase M56 BlaR1 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGA7_9FIRM
Peptidase M56 BlaR1 {ECO:0000313|EMBL:CDA25925.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
peptidase M56 family protein
L1_008_364G1_scaffold_606_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18835..20082
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V381_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77846.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_008_364G1_scaffold_606_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20079..21500)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77847.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_008_364G1_scaffold_606_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21580..22446
DNA (867bp) protein (289aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHV7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ77848.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulator
Displaying 26 items

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