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L1_008_364G1_scaffold_813

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_813_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(267..1808)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFX0_9FIRM
L1_008_364G1_scaffold_813_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1864..2610)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=2 Tax=environmental samples RepID=R5UPC0_9FIRM
L1_008_364G1_scaffold_813_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2660..3883)
DNA (1224bp) protein (408aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphoglycerate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH79_9FIRM
phosphoglycerate kinase
L1_008_364G1_scaffold_813_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4125..5141)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA94_9FIRM
L1_008_364G1_scaffold_813_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5331..6134
DNA (804bp) protein (268aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRR9_9FIRM
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:CDA24151.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_813_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6394..8151)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24150.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC transporter
L1_008_364G1_scaffold_813_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8289..9806)
DNA (1518bp) protein (506aa)
Stage IV sporulation protein A n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHD2_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CDA24149.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
stage IV sporulation protein A
L1_008_364G1_scaffold_813_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9871..11430)
DNA (1560bp) protein (520aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9L5_9FIRM
L1_008_364G1_scaffold_813_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11601..12860
DNA (1260bp) protein (420aa)
Chloride channel protein EriC n=1 Tax=Roseburia sp. CAG:18 RepID=R5V376_9FIRM
Chloride channel protein EriC {ECO:0000313|EMBL:CCZ77841.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Chloride channel protein EriC
L1_008_364G1_scaffold_813_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12857..14770)
DNA (1914bp) protein (638aa)
pullulanase, type I (EC:3.2.1.41)
Pullulanase type I n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRR6_9FIRM
Pullulanase type I {ECO:0000313|EMBL:CDA24146.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_813_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14974..15984)
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBA0_9FIRM
L1_008_364G1_scaffold_813_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16073..16870)
DNA (798bp) protein (266aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHC7_9FIRM
L1_008_364G1_scaffold_813_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16900..17742)
DNA (843bp) protein (281aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9L1_9FIRM
Displaying 13 items

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