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L1_008_364G1_scaffold_861

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_861_1
unknown

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3..92
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_364G1_scaffold_861_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(798..1658)
DNA (861bp) protein (287aa)
Probable lipase/esterase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWJ4_9FIRM
Probable lipase/esterase {ECO:0000313|EMBL:CDA25891.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative lipase/esterase
L1_008_364G1_scaffold_861_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1655..3166)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25892.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_861_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3233..4138)
DNA (906bp) protein (302aa)
Chemotaxis signal transduction protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEJ8_9FIRM
Chemotaxis signal transduction protein {ECO:0000313|EMBL:CDA25893.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Chemotaxis signal transduction protein
L1_008_364G1_scaffold_861_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4157..4858)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YML4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25894.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_861_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4944..6419)
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YG75_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L1_008_364G1_scaffold_861_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6440..7123)
DNA (684bp) protein (228aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWJ8_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDA25896.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_364G1_scaffold_861_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7126..7674)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25897.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_861_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7677..9647)
DNA (1971bp) protein (657aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEK4_9FIRM
L1_008_364G1_scaffold_861_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10025..10765
DNA (741bp) protein (247aa)
Helix-turn-helix n=1 Tax=Roseburia sp. CAG:197 RepID=R5YML9_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDA25899.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Helix-turn-helix.
L1_008_364G1_scaffold_861_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11518..12243)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YG81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25900.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
exonuclease, DNA polymerase III, epsilon subunit family
L1_008_364G1_scaffold_861_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12272..13609)
DNA (1338bp) protein (446aa)
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWK2_9FIRM
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases {ECO:0000313|EMBL:CDA25901.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L1_008_364G1_scaffold_861_13
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13628..13927)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NF78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05671.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L1_008_364G1_scaffold_861_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14205..14591
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25903.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_861_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14578..14919
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YMM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25904.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_861_16
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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15842..16225
DNA (384bp) protein (128aa)
Site-specific recombinase, phage integrase family n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LK61_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFU77701.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
integrase family protein
Displaying 16 items

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