ggKbase home page

L1_008_364G1_scaffold_989

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_989_1
unknown

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

L1_008_364G1_scaffold_989_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

220..426
DNA (207bp) protein (69aa)
Putative membrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUR5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDA25186.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_989_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(465..887)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25185.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_989_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(984..1955)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YKJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25184.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
serine-type D-Ala-D-Ala carboxypeptidase
L1_008_364G1_scaffold_989_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1939..2334)
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Methylglyoxal synthase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCB1_9FIRM
methylglyoxal synthase
L1_008_364G1_scaffold_989_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2350..3462)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25182.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Bacterial cell division membrane protein
L1_008_364G1_scaffold_989_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3464..3649)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25181.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_989_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3657..4469)
DNA (813bp) protein (271aa)
Site-determining protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE74_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
septum site-determining protein MinD
L1_008_364G1_scaffold_989_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4510..7317)
DNA (2808bp) protein (936aa)
Peptidoglycan glycosyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YKI7_9FIRM
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CDA25179.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
peptidoglycan glycosyltransferase
L1_008_364G1_scaffold_989_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7307..7831)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25178.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_989_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7844..8776)
DNA (933bp) protein (311aa)
Cell shape-determining protein MreC n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8Q2_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
rod shape-determining protein
L1_008_364G1_scaffold_989_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8785..9801)
DNA (1017bp) protein (339aa)
HSP70 class molecular chaperones involved in cell morphogenesis n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUQ3_9FIRM
HSP70 class molecular chaperones involved in cell morphogenesis {ECO:0000313|EMBL:CDA25176.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
rod shape-determining protein MreB
L1_008_364G1_scaffold_989_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9818..10510)
DNA (693bp) protein (231aa)
DNA replication and repair protein RadC n=1 Tax=Roseburia sp. CAG:197 RepID=R5YE69_9FIRM
DNA replication and repair protein RadC {ECO:0000313|EMBL:CDA25175.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA replication and repair protein RadC
L1_008_364G1_scaffold_989_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10557..11855)
DNA (1299bp) protein (433aa)
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme n=1 Tax=Roseburia sp. CAG:197 RepID=R5YKI4_9FIRM
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme {ECO:0000313|EMBL:CDA25174.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme
L1_008_364G1_scaffold_989_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11833..12795)
DNA (963bp) protein (321aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCA3_9FIRM
L1_008_364G1_scaffold_989_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12792..14756)
DNA (1965bp) protein (655aa)
DNA mismatch repair protein MutL n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8P8_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA mismatch repair enzyme (putative ATPase)
L1_008_364G1_scaffold_989_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14785..14868)
DNA (84bp) protein (28aa)
DNA mismatch repair protein MutS n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUP9_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA mismatch repair protein MutS
Displaying 17 items

View Taxonomy