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L1_008_364G1_scaffold_1019

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_1019_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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202..1464
DNA (1263bp) protein (421aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z7E9_9FIRM
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDA24737.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
methyl-accepting chemotaxis sensory transducer
L1_008_364G1_scaffold_1019_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1669..1932
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YB16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24738.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1019_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1892..2953
DNA (1062bp) protein (354aa)
Iron-only hydrogenase maturation protein HydE n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK82_9FIRM
Iron-only hydrogenase maturation protein HydE {ECO:0000313|EMBL:CCZ78708.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
biotin synthase
L1_008_364G1_scaffold_1019_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2994..4421
DNA (1428bp) protein (476aa)
Iron-only hydrogenase maturation protein HydG n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z4T2_9FIRM
Iron-only hydrogenase maturation protein HydG {ECO:0000313|EMBL:CDA23832.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
iron-only hydrogenase maturation protein HydG
L1_008_364G1_scaffold_1019_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4445..5659
DNA (1215bp) protein (405aa)
GTP-binding protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y8Q0_9FIRM
GTP-binding protein {ECO:0000313|EMBL:CDA23833.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
iron-only hydrogenase maturation protein HydF
L1_008_364G1_scaffold_1019_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5684..6271
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23834.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1019_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6636..7670
DNA (1035bp) protein (345aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Roseburia sp. CAG:197 RepID=R5YA96_9FIRM
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CDA23835.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC-type uncharacterized transport system, periplasmic component
L1_008_364G1_scaffold_1019_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7712..8593
DNA (882bp) protein (294aa)
ABC transporter integral membrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YQW8_9FIRM
ABC transporter integral membrane protein {ECO:0000313|EMBL:CDA23836.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC transporter permease
L1_008_364G1_scaffold_1019_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8594..9367
DNA (774bp) protein (258aa)
Putative ABC-transporter ATP-binding component n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z4T7_9FIRM
Putative ABC-transporter ATP-binding component {ECO:0000313|EMBL:CDA23837.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC-type uncharacterized transport system, ATPase component
L1_008_364G1_scaffold_1019_10
unknown

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9398..9754
DNA (357bp) protein (119aa)

This feature has no annotations

L1_008_364G1_scaffold_1019_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9897..10307
DNA (411bp) protein (137aa)
MATE efflux family protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGG3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDA23839.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
putative efflux protein, MATE family
L1_008_364G1_scaffold_1019_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10400..11776
DNA (1377bp) protein (459aa)
Predicted ATPase of the AAA superfamily n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNK2_9FIRM
Predicted ATPase of the AAA superfamily {ECO:0000313|EMBL:CCY31268.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative ATPase of the AAA superfamily
L1_008_364G1_scaffold_1019_13
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11925..13040
DNA (1116bp) protein (372aa)
5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YUH1_9FIRM
5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase {ECO:0000313|EMBL:CDA25081.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
L1_008_364G1_scaffold_1019_14
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13547..14404)
DNA (858bp) protein (286aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Methylenetetrahydrofolate reductase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC38_9FIRM
5,10-methylenetetrahydrofolate reductase
Displaying 14 items

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