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L1_008_364G1_scaffold_1022

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_1022_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..431)
DNA (429bp) protein (143aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z886_9FIRM
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CDA24987.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_1022_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(517..1473)
DNA (957bp) protein (319aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YU86_9FIRM
bifunctional riboflavin kinase/FMN adenylyltransferase
L1_008_364G1_scaffold_1022_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1483..2376)
DNA (894bp) protein (298aa)
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CBL09185.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
tRNA pseudouridine synthase B n=2 Tax=Roseburia intestinalis RepID=D4KQN3_9FIRM
L1_008_364G1_scaffold_1022_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2384..3331)
DNA (948bp) protein (316aa)
Exopolyphosphatase-related proteins n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z877_9FIRM
Exopolyphosphatase-related proteins {ECO:0000313|EMBL:CDA24982.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Exopolyphosphatase-related proteins
L1_008_364G1_scaffold_1022_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3318..3698)
DNA (381bp) protein (127aa)
Ribosome-binding factor A n=1 Tax=Roseburia sp. CAG:197 RepID=R5YU79_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ribosome-binding factor A
L1_008_364G1_scaffold_1022_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3707..6409)
DNA (2703bp) protein (901aa)
Translation initiation factor IF-2 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDM0_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
bacterial translation initiation factor 2 (bIF-2)
L1_008_364G1_scaffold_1022_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6426..6737)
DNA (312bp) protein (104aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YJX6_9FIRM
Ribosomal protein L7Ae/L30e/S12e/Gadd45 {ECO:0000313|EMBL:CDA24979.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
50S ribosomal protein L7Ae/L30e/S12e/Gadd45
L1_008_364G1_scaffold_1022_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6724..6996)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24978.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1022_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6999..8168)
DNA (1170bp) protein (390aa)
Transcription elongation factor NusA n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z871_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
transcription elongation factor NusA
L1_008_364G1_scaffold_1022_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8214..8681)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Roseburia sp. CAG:197 RepID=R5YU73_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1022_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8875..10209)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24975.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
proteinase inhibitor I4 serpin
L1_008_364G1_scaffold_1022_12
unknown

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comp(10261..11301)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium acetobutylicum DSM 1731 RepID=F7ZYV1_CLOAT
Hypothetical Protein
L1_008_364G1_scaffold_1022_13
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11947..12489)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y4G6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ11534.1}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azotofixans).;"
L1_008_364G1_scaffold_1022_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12704..13210)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78989.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_008_364G1_scaffold_1022_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13241..13981)
DNA (741bp) protein (247aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKQ1_9FIRM
GHKL domain protein {ECO:0000313|EMBL:AJD31010.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_008_364G1_scaffold_1022_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13971..14480)
DNA (510bp) protein (170aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4I0_CLOSW
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADL05050.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Displaying 16 items

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