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L1_008_364G1_scaffold_1028

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_1028_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..547)
DNA (546bp) protein (182aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
spermidine/putrescine ABC transporter ATP-binding subunit (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAG7_9FIRM
L1_008_364G1_scaffold_1028_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(589..1128)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YR19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23891.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted transcriptional regulators
L1_008_364G1_scaffold_1028_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1557..1874
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z4Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23892.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1028_4
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1876..2403
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y8V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23893.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1028_5
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2400..3047
DNA (648bp) protein (216aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGL7_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA23894.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1028_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3076..4476
DNA (1401bp) protein (467aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAH3_9FIRM
L1_008_364G1_scaffold_1028_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4716..5807
DNA (1092bp) protein (364aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase (Non-peptidoglycan organisms) n=1 Tax=Roseburia sp. CAG:197 RepID=R5YR26_9FIRM
Aspartate-semialdehyde dehydrogenase (Non-peptidoglycan organisms) {ECO:0000313|EMBL:CDA23896.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_1028_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5956..7317
DNA (1362bp) protein (454aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN50_9FIRM
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CCZ79495.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted ATPase (AAA+ superfamily)
L1_008_364G1_scaffold_1028_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7329..10922
DNA (3594bp) protein (1198aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA topoisomerase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y8V9_9FIRM
Topoisomerase IA
L1_008_364G1_scaffold_1028_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10964..11644
DNA (681bp) protein (227aa)
Transferase LpxA family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGM3_9FIRM
Transferase LpxA family {ECO:0000313|EMBL:CDA23899.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1028_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11799..12491
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UML2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79498.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
NifU homolog involved in Fe-S cluster formation
L1_008_364G1_scaffold_1028_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12512..13525
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79499.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying 12 items

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