ggKbase home page

L1_008_364G1_scaffold_1777

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_1777_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..945
DNA (945bp) protein (315aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Type II secretory pathway pullulanase PulA and related glycosidases n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z987_9FIRM
Type II secretory pathway pullulanase PulA and related glycosidases {ECO:0000313|EMBL:CDA25357.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_008_364G1_scaffold_1777_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

942..1541
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YV68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25356.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_364G1_scaffold_1777_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1628..2251
DNA (624bp) protein (208aa)
RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEQ7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
sporulation sigma factor SigK
L1_008_364G1_scaffold_1777_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2265..3881
DNA (1617bp) protein (539aa)
Mg chelatase-related protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4L2_9FIRM
Mg chelatase-related protein {ECO:0000313|EMBL:CCZ78401.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Mg chelatase-related protein
L1_008_364G1_scaffold_1777_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3881..4957
DNA (1077bp) protein (359aa)
DNA protecting protein DprA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK31_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:CCZ78400.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
DNA protecting protein DprA
L1_008_364G1_scaffold_1777_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4982..7057
DNA (2076bp) protein (692aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCB6_9FIRM
L1_008_364G1_scaffold_1777_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7159..7938
DNA (780bp) protein (260aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Roseburia sp. CAG:197 RepID=R5YIF3_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
GTP-sensing transcriptional pleiotropic repressor CodY
L1_008_364G1_scaffold_1777_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8110..8415
DNA (306bp) protein (102aa)
Flagellar basal body rod protein FlgB n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAK8_9FIRM
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
flagellar basal-body rod protein FlgB
Displaying 8 items

View Taxonomy