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L1_008_364G1_scaffold_394_6

Organism: dasL1_008_364G1_concoct_8_fa

near complete RP 46 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: comp(3734..7279)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1181.0
  • Bit_score: 2329
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC30_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1181.0
  • Bit_score: 2329
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 1176.0
  • Bit_score: 1790
  • Evalue 0.0

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Taxonomy

Roseburia sp. CAG:197 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3546
TTGAGAGCATTTGTAGAACCGTTAGAAGAATTAAGCGGATTTGAAGAAATGACGCACAACATGCAGCAGGAGGGCCTGATTTCCATTACAGGCTGCATCGATGCGCAAAAACCACATATGATTTATGGAGTTGGCAATGGTCGTAAAAATAAGATCATTGTCACTTTTCATGAGCAGAAAGCAAAAGAATTATACGAGGATTACCGCTTTTTTGATCCGGCGGTTGTCTACTATCCGGCAAAGGATGTTCTGTTTTACCAGTCCGATATCCGGGGAAATCTGTTGACGGCGGAGCGTATTCAGGCATTGCGTGCCATTCATGAGCAGGATGAGGTAACGGTTATCACGACATTCGATGCGCTTATGAATACCATGGCACCTGCAAAGCAGCTTTGGGACAGCATCTGTCGGATTGCGCCGGAGGATACCATTGATTTAGAACATATGAAGGATCTTCTGGTCTGTATGGGATATGAAAAAGAGTATCAGGTGGAGAGCATGGGACAATTTGCTATCCGTGGCGGTATTCTGGATATTTTTCCGCTGACAGAAGACAATCCGGTCCGTATCGAGATGTGGGGGGATGAAGTAGATACGATTCGTTCTTTCGATGTGGAAAGTCAAAAGTCGATTGAGAATCTAGACGAAGTAGTGATATATCCGGCTTGCGAGCTGGTGCTTACAGAAGCAGAGAAGAGAGCAGGTATCGAAAAACTGCTAAAAGAGGCAGAATCTTTTTCGAAAAAGCTGCGGAAAGAAATGAAGACGGAGGAAGCACACCGTGCGCTGTCACAGGCACAGGAACTGGCAGAAGAGTGGGGAGAACTGGCGGTCACTGCCGGAATGGACGCCTTTTTGTCTTATTTCTGTGAAGCGAAGGTGGGACTTTTGGATTATTTTGATCCAAAAGAAACCTATCTGTTTATCGATGAACTCAGTAGGAGTACCGAGCGTGGCCGGCAGACCGAACTTGAATTTTCAGAGAGCATGAAGCAGCGACTCGAGAAAGGCTATATTTTGCCCGGACAGATGAAAGAACTGTTTGGGTACAAAGAAATCATGGGACGGCTGGAGCATTTTTCCTGTATCGCGCTGGCGGCATTGGATACCAAAAGCTGTGGACTGAAATTAAACGGGTCTTATGGCATTCATGTAAAAAGCGTCAACTCTTACAATAACAGTTTTGAACTTCTTATTAAAGATCTGAACCATTATAAAAAAAATGGTTATAAAGTGATTCTGTTGTCCGGTTCGAAAACGAGGGCGGCAAGGCTCGCAGAGGATATTTTAAATGAAGGTTTAAATTGTTTCTACACAGAGGATTATGACCATGAATTGCTTCCGGGACAGATTATGGTCTGCTATGGAAAAGTACACAGAGGGTATGAGTATCCGGTACTGCAGTTCGCGGTGATCACAGAGAGTGATATTTTCGGTGCAGAGAAGAAAAAGAAAAAACGTCACCGTACTTATGAGGGTGAGAAAATCCAGAACTTTACGGACTTAAGCGTAGGCGATTATGTAGTACATGAGAATCATGGATTGGGCGTGTATAAAGGAATTGAAAAGATTGAGGTAGATCATAAAGTAAAAGATTATATTAAAATCGAGTATGCCGGAGGTTCGAATCTTTATATTCTTGCAACGCAGTTGGAACTGATTCAGAAATATGCGGGCAAGGATGCGCGGAAACCGAAGCTGAACAAGCTGGGTGGACAGGAATGGGGCAGGACAAAGAATCGTGTCCGTGGCGCGGTCAGACAGATTGCACAGGATCTTGTGAAACTGTATGCGGCACGAGAGGAACAGGACGGATTTGTCTATGGCCCGGATACTGTATGGCAGCGGGAGTTTGAGGAACTGTTTCCGTTTGAAGAGACCGAAGACCAGGAACTTGCAATCGAGGCAACGAAGAAGGACATGGAAAGCCACAAGATTATGGACCGTCTGATCTGTGGTGATGTGGGATATGGCAAAACAGAGATTGCCATCCGCGCGGCATTTAAGGCAGTGCAGGAGAATAAACAGGTCGCCTATCTGGCACCGACCACGATTCTTGCACAGCAGATCTATAATACCTTTTCACAGCGCATGAAAGACTTTCCGGTTCGCGTGGATCTGCTGTGCCGTTTCCGGAGTGCGGCGGAACAGAAACATTCCATCGAAGATCTGCGAAAAGGCCAGGTGGATATTATCGTCGGTACGCACCGGCTGCTTTCTAAAGATGTACAGTTCAAAGATCTGGGGCTGCTTGTCGTAGATGAGGAACAGCGCTTTGGAGTGGCACATAAAGAAAAAATCAAACAGTTAAAAAACAACGTGGATGTACTGACGCTGACCGCCACACCGATTCCACGAACACTTCATATGAGCCTGATTGGTATCCGTGACATGAGCGTGTTAGAGGAGCCGCCGATGGACCGTGTGCCGATACAGACCTATGTCATGGAGTATAACGAGGAGCTGGTGAGGGAAGCAATCAACCGTGAGCTTGCCAGAGGCGGTCAGGCGTATTATGTATACAATCGTGTAAGAGATATCGATGAGATGGCAACAAAAATCCAGGCACTTGTGCCGGAGGCAAATGTGGCGTTTGCACATGGACAGATGCGGGAGACTCAGCTGGAAGATATCATGTATCGTTTTATCAATGGAGAGATTGATGTACTGGTGTCTACGACAATTATTGAAACAGGACTTGATATTTCAAATGTGAATACAATGATTATTCATGACGCGGATAACATGGGCCTTTCCCAGTTGTATCAGTTGCGTGGACGTGTGGGGAGATCCAATCGTACGGCGTACGCATTTCTTATGTATCGCAGAAATAAAATGCTCAAAGAGGTGGCAGAAAAAAGACTTGCCGCCATCAAAGAATATTCGGATCTCGGAAGTGGTTTTAAGATTGCGATGCGTGATCTGGAAATCCGTGGCGCGGGAAATCTTCTCGGCGCAGAGCAGAGTGGACATATGGAAGCTGTGGGATATGACCTGTACTGCAAGATGCTCCATGAAGCTGTACGGGAGGCAAAGGGCAATGTGATGGAGGAAAGCTTTGATACATCTGTGGATATCCGGACAGATGCTTACATTCCGGCAACTTATATTGCAAATGAATCCCAGAAGCTGGATATCTACAAGAGGATTGCAGGTGTGGAGACAGATAATGAGGCAGAGGAAATGTTAGAAGAACTGATCGACCGTTTTGGGGAGCCACCGAAGTCGGTACAGAACCTTCTTACGATTGCCCGGCTGAAGAGTCTTGCACATAGCGCATACATTAAAGAAGTGATACAGAAAGAGGATTCCTTAAAACTTGTGATGTATGAGCATGCAAAGGTAGATGCTGCAAGGATTCCGGAGCTTGTGCAGGCAAATGCACCGGCACTGAAATTTGTGGCAGACGCCAAAGGCCCTTATTTTACCTATCTGCTGAAAGTAAATTCCAGACAGGCTGCAAATGATGTGCTGGATACACTGCGCCGACTTTTGGAACAGATGAAAACGGTCTTATGCACAGAAAATGCAGAAAGTTCTTGCTAG
PROTEIN sequence
Length: 1182
LRAFVEPLEELSGFEEMTHNMQQEGLISITGCIDAQKPHMIYGVGNGRKNKIIVTFHEQKAKELYEDYRFFDPAVVYYPAKDVLFYQSDIRGNLLTAERIQALRAIHEQDEVTVITTFDALMNTMAPAKQLWDSICRIAPEDTIDLEHMKDLLVCMGYEKEYQVESMGQFAIRGGILDIFPLTEDNPVRIEMWGDEVDTIRSFDVESQKSIENLDEVVIYPACELVLTEAEKRAGIEKLLKEAESFSKKLRKEMKTEEAHRALSQAQELAEEWGELAVTAGMDAFLSYFCEAKVGLLDYFDPKETYLFIDELSRSTERGRQTELEFSESMKQRLEKGYILPGQMKELFGYKEIMGRLEHFSCIALAALDTKSCGLKLNGSYGIHVKSVNSYNNSFELLIKDLNHYKKNGYKVILLSGSKTRAARLAEDILNEGLNCFYTEDYDHELLPGQIMVCYGKVHRGYEYPVLQFAVITESDIFGAEKKKKKRHRTYEGEKIQNFTDLSVGDYVVHENHGLGVYKGIEKIEVDHKVKDYIKIEYAGGSNLYILATQLELIQKYAGKDARKPKLNKLGGQEWGRTKNRVRGAVRQIAQDLVKLYAAREEQDGFVYGPDTVWQREFEELFPFEETEDQELAIEATKKDMESHKIMDRLICGDVGYGKTEIAIRAAFKAVQENKQVAYLAPTTILAQQIYNTFSQRMKDFPVRVDLLCRFRSAAEQKHSIEDLRKGQVDIIVGTHRLLSKDVQFKDLGLLVVDEEQRFGVAHKEKIKQLKNNVDVLTLTATPIPRTLHMSLIGIRDMSVLEEPPMDRVPIQTYVMEYNEELVREAINRELARGGQAYYVYNRVRDIDEMATKIQALVPEANVAFAHGQMRETQLEDIMYRFINGEIDVLVSTTIIETGLDISNVNTMIIHDADNMGLSQLYQLRGRVGRSNRTAYAFLMYRRNKMLKEVAEKRLAAIKEYSDLGSGFKIAMRDLEIRGAGNLLGAEQSGHMEAVGYDLYCKMLHEAVREAKGNVMEESFDTSVDIRTDAYIPATYIANESQKLDIYKRIAGVETDNEAEEMLEELIDRFGEPPKSVQNLLTIARLKSLAHSAYIKEVIQKEDSLKLVMYEHAKVDAARIPELVQANAPALKFVADAKGPYFTYLLKVNSRQAANDVLDTLRRLLEQMKTVLCTENAESSC*