ggKbase home page

L2_013_000G1_scaffold_3163

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_3163_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


2..1783
DNA (1782bp) protein (594aa)
Aspartate--tRNA ligase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BND0_VEIPT
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACZ24887.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L2_013_000G1_scaffold_3163_2
unknown

Not on your lists

comp(1849..2064)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_013_000G1_scaffold_3163_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2271..3572
DNA (1302bp) protein (434aa)
UPI0003D5F339 related cluster n=1 Tax=unknown RepID=UPI0003D5F339
Recombination factor protein RarA {ECO:0000313|EMBL:ETI97117.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATPase AAA
L2_013_000G1_scaffold_3163_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3655..6399
DNA (2745bp) protein (915aa)
FtsK/SpoIIIE family protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YS27_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFB85400.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
cell division protein FtsK
L2_013_000G1_scaffold_3163_5
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6448..6900
DNA (453bp) protein (151aa)
Transcriptional regulator, nRE family n=4 Tax=Veillonella RepID=T0UFE1_9FIRM
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFG23938.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
XRE family transcriptional regulator
L2_013_000G1_scaffold_3163_6
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6940..8886
DNA (1947bp) protein (649aa)
UPF0313 protein HMPREF0873_00587 n=2 Tax=Veillonella RepID=D6KIJ0_9FIRM
UPF0313 protein HMPREF0873_00587 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
radical SAM protein
L2_013_000G1_scaffold_3163_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8943..9980
DNA (1038bp) protein (346aa)
ABC transporter, solute-binding protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EGL76452.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
extracellular solute-binding protein
L2_013_000G1_scaffold_3163_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10022..11386
DNA (1365bp) protein (455aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U3_9FIRM
MiaB-like tRNA modifying enzyme YliG
L2_013_000G1_scaffold_3163_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11424..12671
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U4_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
competence/damage-inducible protein CinA
L2_013_000G1_scaffold_3163_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


12676..13716
DNA (1041bp) protein (347aa)
Protein RecA n=3 Tax=Veillonella RepID=T0UFD6_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
recA protein
L2_013_000G1_scaffold_3163_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13719..14162
DNA (444bp) protein (148aa)
Regulatory protein RecX n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
regulatory protein RecX
L2_013_000G1_scaffold_3163_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14281..14445
DNA (165bp) protein (55aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribonuclease Y n=4 Tax=Veillonella parvula RepID=T0T3U2_9FIRM
RNA binding metal dependent phosphohydrolase
Displaying 12 items

View Taxonomy