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L2_013_000G1_scaffold_7

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Displaying items 1-30 of 255 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_7_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..265
DNA (264bp) protein (88aa)
YdjC-like family protein n=12 Tax=Clostridium difficile RepID=T3EJG2_CLODI
Putative cellobiose-phosphate degrading protein {ECO:0000313|EMBL:CCK99558.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
cellobiose-phosphate degrading protein
L2_013_000G1_scaffold_7_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(471..611)
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=U3Y9W1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHI98988.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L2_013_000G1_scaffold_7_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

878..1633
DNA (756bp) protein (252aa)
Phosphosugar-binding transcriptional regulator n=63 Tax=Clostridium difficile RepID=C9XQG1_CLODC
phosphosugar-binding transcriptional regulator
Phosphosugar-binding transcriptional regulator {ECO:0000313|EMBL:CBE06606.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_013_000G1_scaffold_7_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1763..3688
DNA (1926bp) protein (642aa)
Heat-responsive suppressor hrsA {ECO:0000313|EMBL:EQE59921.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQE59921.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
mngA; PTS system, 2-O-a-mannosyl-D-glycerate-specificIIABC component (EC:2.7.1.69)
Heat-responsive suppressor hrsA n=2 Tax=Clostridium difficile RepID=T4PHD6_CLODI
L2_013_000G1_scaffold_7_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3832..6447
DNA (2616bp) protein (872aa)
mngB; Alpha-mannosidase (EC:3.2.1.24)
Alpha-mannosidase {ECO:0000313|EMBL:CAJ69977.1}; EC=3.2.1.24 {ECO:0000313|EMBL:CAJ69977.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Alpha-mannosidase mngB n=2 Tax=Clostridium difficile RepID=T4PI50_CLODI
L2_013_000G1_scaffold_7_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6726..7880
DNA (1155bp) protein (385aa)
garK; glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:CEJ99722.1}; EC=2.7.1.31 {ECO:0000313|EMBL:CEJ99722.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Glycerate kinase family protein n=36 Tax=Clostridium difficile RepID=T3G6K3_CLODC
L2_013_000G1_scaffold_7_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8003..9916)
DNA (1914bp) protein (638aa)
Transcription antiterminator, PTS operon regulator n=32 Tax=Clostridium difficile RepID=Q184S1_CLOD6
Transcription antiterminator, PTS operonregulator
Transcription antiterminator {ECO:0000313|EMBL:CKG84416.1}; Transcription antiterminator, PTS operonregulator {ECO:0000313|EMBL:CEJ99721.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_7_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10131..10475
DNA (345bp) protein (115aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=33 Tax=Clostridium difficile RepID=G6BYP7_CLODI
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EHJ34431.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
PTS system, lactose/cellobiose-family IIBcomponent
L2_013_000G1_scaffold_7_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10498..11730
DNA (1233bp) protein (411aa)
Phosphotransferase system, EIIC family protein n=2 Tax=Clostridium difficile RepID=T4PHD0_CLODI
PTS system transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_013_000G1_scaffold_7_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11759..12112
DNA (354bp) protein (118aa)
PTS system, IIa component n=41 Tax=Clostridium difficile RepID=C9XQF4_CLODC
PTS system transporter subunit IIA
PTS system, lactose/cellobiose-family IIA component {ECO:0000313|EMBL:CCL31326.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_000G1_scaffold_7_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12143..13579
DNA (1437bp) protein (479aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CCL31325.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CCL31325.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Aryl-phospho-beta-D-glucosidase BglH n=2 Tax=Clostridium difficile RepID=T4PH14_CLODI
6-phospho-beta-glucosidase
L2_013_000G1_scaffold_7_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13678..14295
DNA (618bp) protein (206aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=T2UD71_CLODI
Putative membrane protein {ECO:0000313|EMBL:CDS88928.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative membrane protein
L2_013_000G1_scaffold_7_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14591..15343
DNA (753bp) protein (251aa)
Phosphosugar-binding transcriptional regulator n=186 Tax=Clostridium difficile RepID=C9XQF1_CLODC
phosphosugar-binding transcriptional regulator
Phosphosugar-binding transcriptional regulator {ECO:0000313|EMBL:CDS89562.1}; Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDT70813.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_7_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15409..16365
DNA (957bp) protein (319aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Tagatose-6-phosphate kinase n=26 Tax=Clostridium difficile RepID=G6BYP2_CLODI
tagK; tagatose (1)-phosphate-kinase
L2_013_000G1_scaffold_7_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16368..18284
DNA (1917bp) protein (639aa)
PTS system, fructose subfamily, IIA component domain protein {ECO:0000313|EMBL:EQE59951.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQE59951.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
PTS system, fructose subfamily, IIA component domain protein n=44 Tax=Clostridium difficile RepID=T2VL08_CLODI
tagT; PTS system transporter subunit IIABC
L2_013_000G1_scaffold_7_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18304..19173
DNA (870bp) protein (290aa)
Tagatose-bisphosphate aldolase {ECO:0000313|EMBL:CCL23460.1}; EC=4.1.2.2 {ECO:0000313|EMBL:CCL23460.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
tagatose-bisphosphate aldolase (EC:4.1.2.2)
Ketose-bisphosphate aldolase family protein n=53 Tax=Clostridium difficile RepID=T2TCW0_CLODI
L2_013_000G1_scaffold_7_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19695..20261)
DNA (567bp) protein (189aa)
ECF-type riboflavin transporter, S component family protein n=16 Tax=Clostridium difficile RepID=T2UG37_CLODI
putative membrane protein
Integral membrane protein {ECO:0000313|EMBL:CKG84669.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ99711.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_7_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20427..20948
DNA (522bp) protein (174aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=G6BYN1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL31311.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
hypothetical protein
L2_013_000G1_scaffold_7_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21747..23825
DNA (2079bp) protein (693aa)
Glycosyl hydrolase n=191 Tax=Clostridium difficile RepID=C9XQE0_CLODC
Glycosyl hydrolases 31 family protein {ECO:0000313|EMBL:EQE59957.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
glycosyl hydrolase
L2_013_000G1_scaffold_7_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23825..24604
DNA (780bp) protein (260aa)
PTS system sorbose-specific iic component family protein n=206 Tax=Clostridium difficile RepID=C9XQD9_CLODC
PTS system transporter subunit IIC
PTS system transporter subunit IIC {ECO:0000313|EMBL:CKG84747.1}; PTS system, xyloside-specific IIC component {ECO:0000313|EMBL:CDS89532.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_7_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24597..25406
DNA (810bp) protein (270aa)
PTS system mannose/fructose/sorbose IID component family protein n=211 Tax=Clostridium difficile RepID=C9XQB0_CLODC
PTS system transporter subunit IID
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQE59930.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_000G1_scaffold_7_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25414..25908
DNA (495bp) protein (165aa)
PTS system, IIb component n=203 Tax=Clostridium difficile RepID=C9XQA9_CLODC
PTS system transporter subunit IIB
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EHJ34453.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_013_000G1_scaffold_7_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25962..26333
DNA (372bp) protein (124aa)
PTS system, xyloside-specific IIA component n=186 Tax=Clostridium difficile RepID=Q184Q3_CLOD6
xynA; PTS system xyloside-specific transporter subunit IIA
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQE59965.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_000G1_scaffold_7_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26489..27649)
DNA (1161bp) protein (387aa)
ROK family protein n=90 Tax=Clostridium difficile RepID=T3GBD7_CLODC
xylR; transcriptional regulator
Transcriptional regulator, Xylose repressor {ECO:0000313|EMBL:CCL31305.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_000G1_scaffold_7_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27857..29407
DNA (1551bp) protein (517aa)
xylB; xylulose kinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Clostridium difficile 050-P50-2011 RepID=G6BDP3_CLODI
Xylulokinase {ECO:0000313|EMBL:EHJ34456.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_013_000G1_scaffold_7_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29476..30840
DNA (1365bp) protein (455aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Xylose isomerase n=6 Tax=Clostridium difficile RepID=C9XQA5_CLODC
xylA; xylose isomerase
L2_013_000G1_scaffold_7_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31363..32562
DNA (1200bp) protein (400aa)
Peptidase S41 family protein n=73 Tax=Clostridium difficile RepID=T3G6C7_CLODC
putative peptidase, S41 family
Putative peptidase, S41 family {ECO:0000313|EMBL:CEJ99701.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_7_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32744..33514
DNA (771bp) protein (257aa)
Phosphosugar-binding transcriptional regulator n=132 Tax=Clostridium difficile RepID=C9XQA3_CLODC
glvR; phosphosugar-binding transcriptional regulator
Phosphosugar-binding transcriptional regulator {ECO:0000313|EMBL:CBE06554.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_013_000G1_scaffold_7_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33684..35249
DNA (1566bp) protein (522aa)
PTS system, alpha-glucoside-specific IIBCcomponent (EC:2.7.1.69)
PTS system, alpha-glucoside-specific IIBC component domain protein n=2 Tax=Clostridium difficile RepID=T4PHB0_CLODI
PTS system maltose-specific EIICB component {ECO:0000313|EMBL:EHJ34460.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_013_000G1_scaffold_7_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35263..36594
DNA (1332bp) protein (444aa)
Phospho-alpha-glucosidase (EC:3.2.1.122)
Phospho-alpha-glucosidase {ECO:0000313|EMBL:CAJ69952.1}; EC=3.2.1.122 {ECO:0000313|EMBL:CAJ69952.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Maltose-6'-phosphate glucosidase n=94 Tax=Clostridium difficile RepID=T3GBF1_CLODC
Displaying items 1-30 of 255 in total

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