ggKbase home page

L2_013_000G1_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_46_1
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

711..1946
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12578.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Retron-type reverse transcriptase
L2_013_000G1_scaffold_46_2
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1897..2145
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12577.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_013_000G1_scaffold_46_3
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2147..2296
DNA (150bp) protein (50aa)
XkdX family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBI0_9CLOT
XkdX family protein {ECO:0000313|EMBL:EFE12576.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_013_000G1_scaffold_46_4
unknown

Not on your lists

2308..2475
DNA (168bp) protein (56aa)

This feature has no annotations

L2_013_000G1_scaffold_46_5
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2518..3072
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBS6_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH64216.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L2_013_000G1_scaffold_46_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3103..3414
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LG03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60367.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_013_000G1_scaffold_46_7
unknown

Not on your lists

3467..4018
DNA (552bp) protein (184aa)

This feature has no annotations

L2_013_000G1_scaffold_46_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4034..4726
DNA (693bp) protein (231aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Lysozyme n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VKH7_9FIRM
Phage-related lysozyme (muraminidase)
L2_013_000G1_scaffold_46_9
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4922..5284
DNA (363bp) protein (121aa)
Transcriptional regulator xre family, bacteriophage lambda repressor c1 like protein n=1 Tax=Bacillus methanolicus PB1 RepID=I3DXX7_BACMT
Transcriptional regulator xre family, bacteriophage lambda repressor c1 like protein {ECO:0000313|EMBL:EIJ79098.1}; TaxID=997296 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus PB1.;"
hypothetical protein
L2_013_000G1_scaffold_46_10
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5281..5796
DNA (516bp) protein (172aa)
Zinc-dependent metallopeptidase n=1 Tax=Bacillus methanolicus PB1 RepID=I3DXX6_BACMT
Zinc-dependent metallopeptidase {ECO:0000313|EMBL:EIJ79097.1}; TaxID=997296 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus PB1.;"
Predicted Zn peptidase
L2_013_000G1_scaffold_46_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6377..6484)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18060.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Mn-containing catalase
L2_013_000G1_scaffold_46_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6485..6757)
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6L2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16865.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_013_000G1_scaffold_46_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6754..6945)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35979.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_000G1_scaffold_46_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7229..8353
DNA (1125bp) protein (375aa)
CobW/P47K family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXL4_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:EEG35981.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Putative GTPases (G3E family)
L2_013_000G1_scaffold_46_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8373..9347
DNA (975bp) protein (325aa)
Putative TIGR03943 family protein n=2 Tax=Eubacterium RepID=C0EXL5_9FIRM
Putative TIGR03943 family protein {ECO:0000313|EMBL:CDB18056.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Putative GTPases (G3E family)
L2_013_000G1_scaffold_46_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9572..9871
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G6I1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17114.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_000G1_scaffold_46_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9837..10631
DNA (795bp) protein (265aa)
ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJ51_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY12862.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_000G1_scaffold_46_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10618..11658
DNA (1041bp) protein (347aa)
NMT1/THI5-like protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJX3_9FIRM
NMT1/THI5-like protein {ECO:0000313|EMBL:CCY12861.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
NMT1/THI5-like domain-containing protein
L2_013_000G1_scaffold_46_19
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11663..12427
DNA (765bp) protein (255aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G704_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB17111.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ABC transporter
L2_013_000G1_scaffold_46_20
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12606..13370)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037F7DCB
Uncharacterized protein {ECO:0000313|EMBL:EGG79400.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
transcriptional regulator, IclR family
L2_013_000G1_scaffold_46_21
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13617..14258
DNA (642bp) protein (214aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6T869_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:CDC54982.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L2_013_000G1_scaffold_46_22
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14261..15286
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AM38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85800.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L2_013_000G1_scaffold_46_23
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15754..16074
DNA (321bp) protein (107aa)
Transcriptional regulator, PadR family n=2 Tax=Eubacterium RepID=C0ETF0_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EEG37478.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
transcriptional regulator, PadR family
L2_013_000G1_scaffold_46_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16067..16801
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GBT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19014.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Predicted membrane protein
L2_013_000G1_scaffold_46_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16824..17621
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13422.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_000G1_scaffold_46_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17849..19678
DNA (1830bp) protein (610aa)
Diol dehydratase / glycerol dehydratase reactivase large subunit n=2 Tax=Eubacterium RepID=C0EXM1_9FIRM
Diol dehydratase / glycerol dehydratase reactivase large subunit {ECO:0000313|EMBL:EEG35988.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
glycerol dehydratase reactivation factor large subunit
L2_013_000G1_scaffold_46_27
unknown

Not on your lists

comp(19685..19792)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_013_000G1_scaffold_46_28
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19996..20877
DNA (882bp) protein (294aa)
EDD domain protein, DegV family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXM2_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EEG35989.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
EDD domain protein, DegV family
L2_013_000G1_scaffold_46_29
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20898..21545
DNA (648bp) protein (216aa)
GDSL-like protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXM3_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EEG35990.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
GDSL-like Lipase/Acylhydrolase
L2_013_000G1_scaffold_46_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21833..22459
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34928.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Resolvase domain protein
Displaying items 1-30 of 172 in total

View Taxonomy