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L2_013_000G1_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_60_1
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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386..574
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35187.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_60_2
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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900..2720
DNA (1821bp) protein (607aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Arginine--tRNA ligase n=4 Tax=root RepID=D1PDN2_9BACT
arginyl-tRNA synthetase
L2_013_000G1_scaffold_60_3
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2885..3349
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDN3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35189.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
putative Ribonuclease H
L2_013_000G1_scaffold_60_4
Prevotella sp. CAG:520, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3462..4019
DNA (558bp) protein (186aa)
RNA polymerase sigma-70 factor expansion family 1 n=1 Tax=Prevotella sp. CAG:520 RepID=R6FRF4_9BACT
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CDB04592.1}; TaxID=1262929 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:520.;"
rpoE; putative RNA polymerase ECF sigma factor
L2_013_000G1_scaffold_60_5
Prevotella sp. CAG:520, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4061..5071
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:520 RepID=R6F6S3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB04591.1}; TaxID=1262929 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:520.;"
anti-sigma factor
L2_013_000G1_scaffold_60_6
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5192..5803
DNA (612bp) protein (204aa)
Galactoside O-acetyltransferase n=1 Tax=Bacteroides sp. CAG:927 RepID=R5AZD2_9BACE
Galactoside O-acetyltransferase {ECO:0000313|EMBL:CCX48660.1}; TaxID=1262753 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:927.;"
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED
L2_013_000G1_scaffold_60_7
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6084..9578
DNA (3495bp) protein (1165aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2ND68_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEF90147.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
Outer membrane receptor proteins, mostly Fe transport
L2_013_000G1_scaffold_60_8
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9598..11331
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DYP4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD94432.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
SusD family.
L2_013_000G1_scaffold_60_9
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11382..12278
DNA (897bp) protein (299aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2ND65_9BACE
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEF90144.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
glycerophosphoryl diester phosphodiesterase
L2_013_000G1_scaffold_60_10
Prevotella baroniae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12330..13229
DNA (900bp) protein (300aa)
Glycerophosphodiester phosphodiesterase domain protein n=1 Tax=Prevotella baroniae F0067 RepID=U2NPW9_9BACT
Glycerophosphodiester phosphodiesterase domain protein {ECO:0000313|EMBL:ERK40095.1}; TaxID=1115809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella baroniae F0067.;"
glycerophosphoryl diester phosphodiesterase
L2_013_000G1_scaffold_60_11
Prevotella salivae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13235..14563
DNA (1329bp) protein (443aa)
Transporter, major facilitator family protein n=1 Tax=Prevotella salivae DSM 15606 RepID=E6MSC9_9BACT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFV03459.1}; TaxID=888832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella salivae DSM 15606.;"
hexose phosphate transport protein
L2_013_000G1_scaffold_60_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15183..17255)
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDN6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35192.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_60_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17470..18294
DNA (825bp) protein (275aa)
Cof-like hydrolase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDN7_9BACT
Cof-like hydrolase {ECO:0000313|EMBL:EFB35193.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
cof family hydrolase
L2_013_000G1_scaffold_60_14
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18385..20346)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDN9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35195.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
alpha-glucosidase family protein
L2_013_000G1_scaffold_60_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20503..21702
DNA (1200bp) protein (400aa)
Threonine ammonia-lyase n=1 Tax=Prevotella copri CAG:164 RepID=R6BSD6_9BACT
Threonine ammonia-lyase {ECO:0000313|EMBL:CDA66998.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
threonine dehydratase
L2_013_000G1_scaffold_60_16
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21842..24187)
DNA (2346bp) protein (782aa)
Glycoside hydrolase family 3 n=1 Tax=Prevotella sp. CAG:386 RepID=R6PQ91_9BACT
Glycoside hydrolase family 3 {ECO:0000313|EMBL:CDC25695.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
beta-glucosidase
L2_013_000G1_scaffold_60_17
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24235..25461)
DNA (1227bp) protein (409aa)
Isoamylase domain/esterase family protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PY42_9BACT
Isoamylase domain/esterase family protein {ECO:0000313|EMBL:CDC25694.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
isoamylase domain/esterase family protein
L2_013_000G1_scaffold_60_18
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25540..26742)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PMT1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC25693.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
isoamylase domain/esterase family protein
L2_013_000G1_scaffold_60_19
Prevotella ruminicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26771..27688)
DNA (918bp) protein (306aa)
Conserved domain protein n=1 Tax=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) RepID=D5EXY2_PRER2
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ADE83314.1}; TaxID=264731 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23).;"
L2_013_000G1_scaffold_60_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27723..29291)
DNA (1569bp) protein (523aa)
Putative lipoprotein n=1 Tax=Prevotella copri CAG:164 RepID=R6CPI6_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDA67147.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
lipoprotein
L2_013_000G1_scaffold_60_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29349..32414)
DNA (3066bp) protein (1022aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSS1_9BACT
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDA67148.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_60_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32485..36708
DNA (4224bp) protein (1408aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C1R0_9BACT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA67149.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
sensor histidine kinase/DNA-binding response regulator
L2_013_000G1_scaffold_60_23
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36796..37170
DNA (375bp) protein (125aa)
Putative endoribonuclease L-PSP n=4 Tax=Prevotella RepID=D1PDP1_9BACT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CDA58207.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
putative endoribonuclease L-PSP
L2_013_000G1_scaffold_60_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37224..38000
DNA (777bp) protein (259aa)
Ferrichrome transport ATP-binding protein FhuC n=1 Tax=Prevotella copri CAG:164 RepID=R6C6V0_9BACT
Ferrichrome transport ATP-binding protein FhuC {ECO:0000313|EMBL:CDA67151.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
iron compound ABC transporter ATP-binding protein
L2_013_000G1_scaffold_60_25
unknown

Not on your lists

38465..38614
DNA (150bp) protein (50aa)

This feature has no annotations

L2_013_000G1_scaffold_60_26
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38580..38951)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=root RepID=D1PDP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35199.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L2_013_000G1_scaffold_60_27
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39143..40327
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35200.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
AAA ATPase
L2_013_000G1_scaffold_60_28
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40396..41235)
DNA (840bp) protein (280aa)
Response regulator receiver domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDP5_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFB35201.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
two-component system response regulator
L2_013_000G1_scaffold_60_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41269..42192)
DNA (924bp) protein (308aa)
Putative two-component system sensor histidine kinase n=1 Tax=Prevotella copri CAG:164 RepID=R6C1T8_9BACT
Putative two-component system sensor histidine kinase {ECO:0000313|EMBL:CDA67184.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
signal transduction histidine kinase, lyts
L2_013_000G1_scaffold_60_30
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42318..44003
DNA (1686bp) protein (562aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EFB35203.1}; EC=5.4.99.- {ECO:0000313|EMBL:EFB35203.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Pseudouridine synthase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDP7_9BACT
pseudouridine synthase
Displaying items 1-30 of 127 in total

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