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L2_013_000G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_61_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(647..1087)
DNA (441bp) protein (147aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MH40_9FIRM
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EOS70138.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L2_013_000G1_scaffold_61_2
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1185..2129)
DNA (945bp) protein (315aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QV43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF41503.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
L2_013_000G1_scaffold_61_3
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2123..3079)
DNA (957bp) protein (319aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02845.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KIR02845.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Transketolase, N-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VAZ1_9FIRM
L2_013_000G1_scaffold_61_4
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3295..5103)
DNA (1809bp) protein (603aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9Q4_9FIRM
Aspartate--tRNA ligase 1 {ECO:0000313|EMBL:CCY12634.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_000G1_scaffold_61_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5134..5727)
DNA (594bp) protein (198aa)
HD domain protein n=2 Tax=Eubacterium RepID=C0ESK6_9FIRM
HD domain protein {ECO:0000313|EMBL:EEG37752.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
uncharacterized domain HDIG
L2_013_000G1_scaffold_61_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5732..7264)
DNA (1533bp) protein (511aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJE1_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:CCY12636.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_000G1_scaffold_61_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7269..7919)
DNA (651bp) protein (217aa)
Metallo-beta-lactamase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GIH5_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CCY12637.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hydroxyacylglutathione hydrolase
L2_013_000G1_scaffold_61_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7960..10239)
DNA (2280bp) protein (760aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G671_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:CCY12638.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_000G1_scaffold_61_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10498..11688)
DNA (1191bp) protein (397aa)
Fibronectin type III domain n=1 Tax=Clostridium sp. CAG:62 RepID=R7C694_9CLOT
Fibronectin type III domain {ECO:0000313|EMBL:CDD73626.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_013_000G1_scaffold_61_10
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11723..12748)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57983.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Fibronectin type III domain.
L2_013_000G1_scaffold_61_11
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13129..14727)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X0S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD09906.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L2_013_000G1_scaffold_61_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14915..15337)
DNA (423bp) protein (141aa)
Aspartate carbamoyltransferase regulatory chain allosteric domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9Q7_9FIRM
Aspartate carbamoyltransferase regulatory chain allosteric domain protein {ECO:0000313|EMBL:CCY12639.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Aspartate carbamoyltransferase, regulatory subunit
L2_013_000G1_scaffold_61_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15327..16253)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G5S2_9FIRM
L2_013_000G1_scaffold_61_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16342..17229)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37746.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_000G1_scaffold_61_15
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17398..18609)
DNA (1212bp) protein (404aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESJ9_9FIRM
L2_013_000G1_scaffold_61_16
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18793..19239)
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESJ8_9FIRM
L2_013_000G1_scaffold_61_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19582..21789
DNA (2208bp) protein (736aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:EEG35352.1}; EC=3.4.21.- {ECO:0000313|EMBL:EEG35352.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Peptidase, S8/S53 family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZG0_9FIRM
peptidase S8/S53 subtilisin kexin sedolisin
L2_013_000G1_scaffold_61_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21770..22534)
DNA (765bp) protein (255aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMM4_9FIRM
L2_013_000G1_scaffold_61_19
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22659..23543)
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Eubacterium RepID=C0EZF7_9FIRM
dihydrodipicolinate synthase
L2_013_000G1_scaffold_61_20
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23665..24183)
DNA (519bp) protein (173aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Putative cob(I)yrinic acid a c-diamide adenosyltransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GD31_9FIRM
Putative cob(I)yrinic acid a c-diamide adenosyltransferase {ECO:0000313|EMBL:CCY13834.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_000G1_scaffold_61_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24239..25486)
DNA (1248bp) protein (416aa)
Histidine--tRNA ligase n=2 Tax=Eubacterium RepID=C0EZF5_9FIRM
Histidine--tRNA ligase {ECO:0000313|EMBL:CDB17330.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
histidyl-tRNA synthetase
L2_013_000G1_scaffold_61_22
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25553..26224)
DNA (672bp) protein (224aa)
Single-strand binding family protein n=2 Tax=Eubacterium RepID=C0EZF4_9FIRM
Single-strand binding family protein {ECO:0000313|EMBL:CDB17329.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Single-stranded DNA-binding protein
L2_013_000G1_scaffold_61_23
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26753..28588
DNA (1836bp) protein (612aa)
GTP-binding protein TypA n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZF3_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:EEG35345.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
GTP-binding protein TypA/BipA
L2_013_000G1_scaffold_61_24
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28685..29332)
DNA (648bp) protein (216aa)
YigZ family protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G940_9FIRM
YigZ family protein {ECO:0000313|EMBL:CCY13830.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
conserved hypothetical protein TIGR00257
L2_013_000G1_scaffold_61_25
unknown

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comp(29462..29764)
DNA (303bp) protein (101aa)

This feature has no annotations

L2_013_000G1_scaffold_61_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30207..30932)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ERW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37980.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted integral membrane protein
L2_013_000G1_scaffold_61_27
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30954..31412)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LDW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56743.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L2_013_000G1_scaffold_61_28
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

31945..33354
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DDA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82186.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_013_000G1_scaffold_61_29
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33698..34135
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ATI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ31426.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L2_013_000G1_scaffold_61_30
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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34207..34548
DNA (342bp) protein (114aa)
Predicted nucleotidyltransferases n=3 Tax=Clostridiales RepID=D4LLN8_9FIRM
Predicted nucleotidyltransferases
Predicted nucleotidyltransferases {ECO:0000313|EMBL:CBL20749.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Displaying items 1-30 of 134 in total

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