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L2_013_000G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_62_1
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(148..633)
DNA (486bp) protein (162aa)
Transposase-like protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q6L7_9FIRM
Transposase-like protein {ECO:0000313|EMBL:CDC32373.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
transposase IS200-family protein
L2_013_000G1_scaffold_62_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(849..1196)
DNA (348bp) protein (116aa)
Cupin domain n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QII2_9FIRM
Cupin domain {ECO:0000313|EMBL:CDC30721.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Cupin domain.
L2_013_000G1_scaffold_62_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1714..2793)
DNA (1080bp) protein (360aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHY3_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFQ07211.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_013_000G1_scaffold_62_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2991..3716)
DNA (726bp) protein (242aa)
LytTr DNA-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H829_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEU95910.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulator of the LytR/AlgR family
L2_013_000G1_scaffold_62_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3786..5156)
DNA (1371bp) protein (457aa)
Transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H830_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Na+-dependent transporters of the SNF family
L2_013_000G1_scaffold_62_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5334..5822)
DNA (489bp) protein (163aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H904_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU95541.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Acetyltransferase (GNAT) family.
L2_013_000G1_scaffold_62_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6048..7595)
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3C6_9FIRM
L2_013_000G1_scaffold_62_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7693..8322)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97607.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_013_000G1_scaffold_62_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8531..9733)
DNA (1203bp) protein (401aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ53_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_013_000G1_scaffold_62_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9905..12031)
DNA (2127bp) protein (709aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Elongation factor G n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3C9_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_013_000G1_scaffold_62_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12056..12526)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=3 Tax=Faecalibacterium prausnitzii RepID=D4JZ51_9FIRM
SSU ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_013_000G1_scaffold_62_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12686..13114)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZH54_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
SSU ribosomal protein S12P
L2_013_000G1_scaffold_62_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13425..17000)
DNA (3576bp) protein (1192aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3D3_9FIRM
L2_013_000G1_scaffold_62_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17125..20952)
DNA (3828bp) protein (1276aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBK99297.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBK99297.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ48_9FIRM
L2_013_000G1_scaffold_62_15

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comp(21389..22045)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B536A8
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AHF23698.1}; TaxID=1393567 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig3a.;"
transcriptional regulator, MerR family
L2_013_000G1_scaffold_62_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22072..22962)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SDU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21002.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Putative transposase, YhgA-like.
L2_013_000G1_scaffold_62_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23083..24159)
DNA (1077bp) protein (359aa)
RNA polymerase sigma factor SigA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3D6_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family
L2_013_000G1_scaffold_62_18
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24203..25981)
DNA (1779bp) protein (593aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
DNA primase, catalytic core (EC:2.7.7.-)
DNA primase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R5M8_9FIRM
L2_013_000G1_scaffold_62_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26004..27002)
DNA (999bp) protein (333aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3D8_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_013_000G1_scaffold_62_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27234..27854)
DNA (621bp) protein (207aa)
Putative YigZ family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3D9_9FIRM
Putative YigZ family protein {ECO:0000313|EMBL:EEU97619.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_013_000G1_scaffold_62_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28401..29330)
DNA (930bp) protein (310aa)
Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDP21334.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_013_000G1_scaffold_62_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29493..30656
DNA (1164bp) protein (388aa)
Transporter, major facilitator family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMM5_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFQ05616.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Fucose permease
L2_013_000G1_scaffold_62_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30683..30934
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SCU2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00904.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_013_000G1_scaffold_62_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31033..31410)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97066.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein of unknown function (DUF1696).
L2_013_000G1_scaffold_62_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31596..33950)
DNA (2355bp) protein (785aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5E4_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEU96832.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
glycoside hydrolase family protein
L2_013_000G1_scaffold_62_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34221..35996)
DNA (1776bp) protein (592aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5E3_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU96831.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases-like protein
L2_013_000G1_scaffold_62_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36331..38103)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96829.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Myosin-crossreactive antigen
L2_013_000G1_scaffold_62_28
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38332..40452)
DNA (2121bp) protein (707aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QBD5_9FIRM
L2_013_000G1_scaffold_62_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40686..40934)
DNA (249bp) protein (83aa)
Preprotein translocase, SecG subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5D9_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EEU96827.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
protein translocase, SecG subunit
L2_013_000G1_scaffold_62_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41034..42623)
DNA (1590bp) protein (530aa)
Cell division protein FtsI/penicillin-binding protein 2 (EC:2.4.1.129)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q4Y4_9FIRM
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDC28074.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Displaying items 1-30 of 132 in total

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