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L2_013_000G1_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_71_1
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

333..2039
DNA (1707bp) protein (569aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QV07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26026.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Subtilase family.
L2_013_000G1_scaffold_71_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2050..3306)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KIP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26027.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_013_000G1_scaffold_71_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3290..3886)
DNA (597bp) protein (199aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26028.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
membrane protein
L2_013_000G1_scaffold_71_4
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3883..4203)
DNA (321bp) protein (107aa)
Transcriptional regulator, PadR family n=4 Tax=Lachnospiraceae RepID=A5KIP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88283.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
transcriptional regulator, PadR family
L2_013_000G1_scaffold_71_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4376..5869)
DNA (1494bp) protein (498aa)
ATP-dependent Clp protease n=4 Tax=Clostridiales RepID=E5XJ39_9FIRM
ATP-dependent Clp protease {ECO:0000313|EMBL:CCZ26029.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_013_000G1_scaffold_71_6
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6012..7973)
DNA (1962bp) protein (654aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=2 Tax=Lachnospiraceae RepID=A5KIP4_9FIRM
L2_013_000G1_scaffold_71_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7918..8019)
DNA (102bp) protein (34aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KIP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88286.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L2_013_000G1_scaffold_71_8
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8016..8750)
DNA (735bp) protein (245aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=3 Tax=Clostridiales RepID=F3ASG7_9FIRM
L2_013_000G1_scaffold_71_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8743..9897)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18780.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_013_000G1_scaffold_71_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9908..11317)
DNA (1410bp) protein (470aa)
Membrane bound O-acyl transferase MBOAT family protein n=5 Tax=Clostridiales RepID=E5XJ35_9FIRM
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:EFV18779.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted membrane protein involved in D-alanine export
L2_013_000G1_scaffold_71_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11339..11824)
DNA (486bp) protein (162aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26035.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_013_000G1_scaffold_71_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11821..12579)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QV17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26036.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Lysophospholipase L1 and related esterases
L2_013_000G1_scaffold_71_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12768..13256
DNA (489bp) protein (163aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88292.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_013_000G1_scaffold_71_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13329..15374)
DNA (2046bp) protein (682aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Clostridiales RepID=A5KIN6_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDK25189.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Molecular chaperone, HSP90 family
L2_013_000G1_scaffold_71_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15625..16155
DNA (531bp) protein (177aa)
Acetyltransferase, GNAT family n=5 Tax=Clostridiales RepID=A5KIN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26039.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
C_GCAxxG_C_C family protein
L2_013_000G1_scaffold_71_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16255..16773)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Clostridiales RepID=A5KIN4_9FIRM
L2_013_000G1_scaffold_71_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16973..18085
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=A5KIN3_9FIRM
Sugar ABC transporter {ECO:0000313|EMBL:EFV18772.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_013_000G1_scaffold_71_18
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18234..19178
DNA (945bp) protein (315aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QZB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88297.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_013_000G1_scaffold_71_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19181..19681
DNA (501bp) protein (167aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26043.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_013_000G1_scaffold_71_20
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19799..20476)
DNA (678bp) protein (226aa)
TIGR00266 family protein n=5 Tax=Clostridiales RepID=A5KIM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18769.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
conserved hypothetical protein TIGR00266
L2_013_000G1_scaffold_71_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20626..22794)
DNA (2169bp) protein (723aa)
Sensor protein n=4 Tax=Lachnospiraceae RepID=E5XJ24_9FIRM
Sensor protein {ECO:0000313|EMBL:EFV18768.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
sensor histidine kinase
L2_013_000G1_scaffold_71_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22766..23464)
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=5 Tax=Clostridiales RepID=A5KIM5_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:EFV18767.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_000G1_scaffold_71_23
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23539..24018)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 8_1_57FAA RepID=E5XJ22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88302.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_013_000G1_scaffold_71_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24104..25489)
DNA (1386bp) protein (462aa)
Glycosyltransferase, group 1 family protein n=5 Tax=Clostridiales RepID=A5KIM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26048.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
group 1 glycosyl transferase
L2_013_000G1_scaffold_71_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25553..26062)
DNA (510bp) protein (170aa)
SNARE-like domain protein n=5 Tax=Clostridiales RepID=A5KIM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26049.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
DedA family protein
L2_013_000G1_scaffold_71_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26172..27437)
DNA (1266bp) protein (422aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=5 Tax=Clostridiales RepID=A5KIM1_9FIRM
L2_013_000G1_scaffold_71_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27445..30057)
DNA (2613bp) protein (871aa)
ATP-dependent chaperone ClpB n=2 Tax=unclassified Lachnospiraceae RepID=E5XJ18_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ATP-dependent chaperone ClpB
L2_013_000G1_scaffold_71_28
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30442..31182)
DNA (741bp) protein (247aa)
Protein TraX n=5 Tax=Clostridiales RepID=A5KIL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18761.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_013_000G1_scaffold_71_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31220..31867)
DNA (648bp) protein (216aa)
DNA-binding helix-turn-helix protein n=4 Tax=Clostridiales RepID=A5KIL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26053.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_013_000G1_scaffold_71_30
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32007..34799)
DNA (2793bp) protein (931aa)
Type III restriction enzyme, res subunit n=2 Tax=Lachnospiraceae RepID=A5KIL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87902.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
type III restriction-modification system, restriction endonuclease subunit
Displaying items 1-30 of 136 in total

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