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L2_013_000G1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_72_1
unknown

Not on your lists

2..208
DNA (207bp) protein (69aa)

This feature has no annotations

L2_013_000G1_scaffold_72_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(396..1454)
DNA (1059bp) protein (353aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Eubacterium RepID=C0EYE5_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDB17567.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ABC-type transporter, integral membrane subunit
L2_013_000G1_scaffold_72_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1480..3009)
DNA (1530bp) protein (510aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=2 Tax=Eubacterium RepID=C0EYE4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG35697.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_013_000G1_scaffold_72_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3046..3687)
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EYE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17565.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_000G1_scaffold_72_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3867..4904)
DNA (1038bp) protein (346aa)
Sugar-binding domain protein n=2 Tax=Eubacterium RepID=C0EYE2_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:CDB17564.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
sugar ABC transporter substrate-binding protein
L2_013_000G1_scaffold_72_6
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5115..6596)
DNA (1482bp) protein (494aa)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
glpK3; glycerol kinase 1 (EC:2.7.1.30)
Putative glycerol kinase n=2 Tax=Eubacterium RepID=C0EYE1_9FIRM
L2_013_000G1_scaffold_72_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6619..7551)
DNA (933bp) protein (311aa)
transketolase subunit B (EC:2.2.1.1)
Transketolase, C-terminal domain protein n=2 Tax=Eubacterium RepID=C0EYE0_9FIRM
Transketolase C-terminal domain protein {ECO:0000313|EMBL:CDB17562.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_000G1_scaffold_72_8
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7544..8371)
DNA (828bp) protein (276aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=2 Tax=Eubacterium RepID=C0EYD9_9FIRM
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEG35692.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_013_000G1_scaffold_72_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8499..9914)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EYD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17560.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L-fucose isomerase and related proteins
L2_013_000G1_scaffold_72_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9916..10944)
DNA (1029bp) protein (343aa)
Sugar-binding domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G7T1_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:CDB17559.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
transcriptional regulator, LacI family
L2_013_000G1_scaffold_72_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11297..12805
DNA (1509bp) protein (503aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9T2_9FIRM
L2_013_000G1_scaffold_72_12
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12817..13566
DNA (750bp) protein (250aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Acyltransferase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GU07_9FIRM
L2_013_000G1_scaffold_72_13
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13740..14279
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EYD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17556.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_000G1_scaffold_72_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14387..14863)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EYC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35676.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_000G1_scaffold_72_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14838..15899)
DNA (1062bp) protein (354aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Eubacterium RepID=C0EYC2_9FIRM
L2_013_000G1_scaffold_72_16
unknown

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comp(16206..16400)
DNA (195bp) protein (65aa)

This feature has no annotations

L2_013_000G1_scaffold_72_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16635..17693)
DNA (1059bp) protein (353aa)
Twitching motility protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EYB0_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EEG35663.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
pilus retraction protein PilT
L2_013_000G1_scaffold_72_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17792..18199)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EYA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35662.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_000G1_scaffold_72_19
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18196..18663)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73439.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L2_013_000G1_scaffold_72_20
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18823..19290)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EYA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35660.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_000G1_scaffold_72_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19336..19659)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EYA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35659.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_000G1_scaffold_72_22
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19764..20813)
DNA (1050bp) protein (350aa)
Bacterial type II secretion system domain protein F n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EYA5_9FIRM
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EEG35658.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Type II secretory pathway, component PulF
L2_013_000G1_scaffold_72_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20901..21575)
DNA (675bp) protein (225aa)
Putative stage II sporulation protein R n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GYH8_9FIRM
Putative stage II sporulation protein R {ECO:0000313|EMBL:CDB19102.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
stage II sporulation protein R
L2_013_000G1_scaffold_72_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21671..24997)
DNA (3327bp) protein (1109aa)
Ig-like domain-containing surface protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N7A5_9FIRM
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CCY97779.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L2_013_000G1_scaffold_72_25
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25623..27722)
DNA (2100bp) protein (700aa)
Spore germination protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETY9_9FIRM
Spore germination protein {ECO:0000313|EMBL:EEG37200.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Spore germination protein.
L2_013_000G1_scaffold_72_26
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27789..29315)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14038.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Bacillus/Clostridium GerA spore germination protein.
L2_013_000G1_scaffold_72_27
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29467..30375
DNA (909bp) protein (303aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETZ1_9FIRM
L2_013_000G1_scaffold_72_28
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30391..31068
DNA (678bp) protein (226aa)
FCD domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETZ2_9FIRM
FCD domain protein {ECO:0000313|EMBL:EEG37203.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
transcriptional regulator, GntR family
L2_013_000G1_scaffold_72_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31192..31818)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZ73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75720.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_72_30
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32213..33799)
DNA (1587bp) protein (529aa)
LysM domain protein n=2 Tax=Eubacterium RepID=C0ETZ7_9FIRM
LysM domain protein {ECO:0000313|EMBL:CDB19095.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
LysM domain.
Displaying items 1-30 of 132 in total

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