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L2_013_000G1_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_78_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

266..874
DNA (609bp) protein (203aa)
Uncharacterized protein n=148 Tax=Clostridium difficile RepID=T2TP73_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL30538.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_000G1_scaffold_78_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1246..1398)
DNA (153bp) protein (51aa)
Uncharacterized protein n=62 Tax=Clostridium difficile RepID=T2UKT3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG77740.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_013_000G1_scaffold_78_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1414..2187)
DNA (774bp) protein (258aa)
ABC-type transport system, permease n=72 Tax=Clostridium difficile RepID=Q18D58_CLOD6
ABC-type transport system, permease
ABC transporter permease {ECO:0000313|EMBL:CKH74750.1}; ABC-type transport system, permease {ECO:0000313|EMBL:CDT72936.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_78_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2198..2935)
DNA (738bp) protein (246aa)
Uncharacterized protein n=57 Tax=Clostridium difficile RepID=G6BQH0_CLODI
ABC-type transport system, permease {ECO:0000313|EMBL:CCL22878.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC-type transport system, permease
L2_013_000G1_scaffold_78_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2928..3851)
DNA (924bp) protein (308aa)
ABC transporter family protein n=2 Tax=Clostridium difficile RepID=T4ZDB4_CLODI
ABC transporter ATP-binding protein
ABC-type transport system,bacitracin/multidrug-family ATP-binding protein {ECO:0000313|EMBL:CCL30541.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_000G1_scaffold_78_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4008..4931)
DNA (924bp) protein (308aa)
Two-component sensor histidine kinase {ECO:0000313|EMBL:CDS83411.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CKH74660.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
His Kinase A domain protein n=2 Tax=Clostridium difficile RepID=T4PT91_CLODI
two-component sensor histidine kinase
L2_013_000G1_scaffold_78_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4933..5634)
DNA (702bp) protein (234aa)
Transcriptional regulatory family protein n=84 Tax=Clostridium difficile RepID=T2TP78_CLODI
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQG77517.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
two-component response regulator
L2_013_000G1_scaffold_78_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5627..5815)
DNA (189bp) protein (63aa)
Uncharacterized protein n=163 Tax=Clostridium difficile RepID=Q18D59_CLOD6
conserved hypothetical protein
Transposase {ECO:0000313|EMBL:CKH74601.1}; Uncharacterized protein {ECO:0000313|EMBL:CDT72989.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_78_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6044..6973
DNA (930bp) protein (310aa)
Uncharacterized protein n=183 Tax=Clostridium difficile RepID=C9XJ99_CLODC
hypothetical protein
AAA domain family protein {ECO:0000313|EMBL:EQG77552.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_013_000G1_scaffold_78_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6987..8759
DNA (1773bp) protein (591aa)
Cobalamin biosynthesis CobT VWA domain protein n=2 Tax=Clostridium difficile RepID=T4PZC5_CLODI
Cobalamin biosynthesis CobT VWA domain protein {ECO:0000313|EMBL:EQG77440.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L2_013_000G1_scaffold_78_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9139..10017
DNA (879bp) protein (293aa)
Cobalamin biosynthesis protein CbiM n=9 Tax=Clostridium difficile RepID=G6B582_CLODI
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
cbiM; Cobalamin biosynthesis protein
L2_013_000G1_scaffold_78_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10007..10291
DNA (285bp) protein (95aa)
Cobalt transport protein CbiN n=155 Tax=Clostridium difficile RepID=T3IMA1_CLODC
cbiN; ABC-type transport system, cobalt-specificextracellular solute-binding protein
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L2_013_000G1_scaffold_78_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10294..10992
DNA (699bp) protein (233aa)
Cobalt ABC transporter, permease protein CbiQ n=20 Tax=Clostridium difficile RepID=T2ZRT7_CLODI
cbiQ1; ABC-type transport system, cobalt-specificpermease
ABC-type transport system, cobalt-specific permease {ECO:0000313|EMBL:CDS83421.1}; ABC-type transport system, cobalt-specificpermease {ECO:0000313|EMBL:CEJ96843.1}; Cobalt transport protein {ECO:0000313|EMBL:CKH74440.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_78_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10982..11803
DNA (822bp) protein (274aa)
cbiO; cobalt-specific ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC-type transport system, cobalt-specific ATP-binding protein {ECO:0000313|EMBL:CCL22889.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL22889.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC-type transport system, cobalt-specific ATP-binding protein n=162 Tax=Clostridium difficile RepID=Q18D67_CLOD6
L2_013_000G1_scaffold_78_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12058..14322
DNA (2265bp) protein (755aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
ATP-dependent DNA helicase n=206 Tax=Clostridium difficile RepID=C9XK50_CLODC
pcrA; ATP-dependent DNA helicase
L2_013_000G1_scaffold_78_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14339..15637
DNA (1299bp) protein (433aa)
aminopeptidase 2 (EC:3.4.11.21)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
M18 family aminopeptidase n=2 Tax=Clostridium difficile RepID=T4PTA2_CLODI
L2_013_000G1_scaffold_78_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15668..16420
DNA (753bp) protein (251aa)
Patatin-like phospholipase family protein n=195 Tax=Clostridium difficile RepID=T3ILW6_CLODC
phospholipase, patatin family
Patatin-like phospholipase family protein {ECO:0000313|EMBL:EQE70164.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_000G1_scaffold_78_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16485..17009
DNA (525bp) protein (175aa)
Peptidyl-prolyl cis-trans isomerase B (PPIase B) (Rotamase B) {ECO:0000313|EMBL:CCL22948.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CCL22948.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Peptidyl-prolyl cis-trans isomerase n=86 Tax=Clostridium difficile RepID=C9XK53_CLODC
ppiB; peptidyl-prolyl cis-trans isomerase
L2_013_000G1_scaffold_78_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17687..19705
DNA (2019bp) protein (673aa)
Collagen triple helix repeat family protein n=2 Tax=Clostridium difficile RepID=T4Q098_CLODI
bclA1; putative exosporium glycoprotein
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:CKH74247.1}; Putative exosporium glycoprotein {ECO:0000313|EMBL:CEJ96849.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_78_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19942..21540)
DNA (1599bp) protein (533aa)
Putative inorganic pyrophosphatase {ECO:0000313|EMBL:CEJ96850.1}; EC=3.6.1.1 {ECO:0000313|EMBL:CEJ96850.1};; Putative manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:CKH74218.1}; EC=3.6.1.1 {ECO:0000313|EMBL:CKH74218.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ppaC; putative inorganic pyrophosphatase (EC:3.6.1.1)
DHHA2 domain protein n=52 Tax=Clostridium difficile RepID=G6BR88_CLODI
L2_013_000G1_scaffold_78_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22418..25060
DNA (2643bp) protein (881aa)
adhE; Aldehyde-alcohol dehydrogenase (EC:1.1.1.1 1.2.1.10)
Aldehyde-alcohol dehydrogenase n=183 Tax=Clostridium difficile RepID=Q18D77_CLOD6
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_000G1_scaffold_78_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25420..25761)
DNA (342bp) protein (114aa)
Uncharacterized protein n=81 Tax=Clostridium difficile RepID=T4PY60_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG78003.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
conserved hypothetical protein
L2_013_000G1_scaffold_78_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25788..26459)
DNA (672bp) protein (224aa)
ABC-type transport system, ATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=13 Tax=Clostridium difficile RepID=G6B646_CLODI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHJ31947.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_013_000G1_scaffold_78_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26471..29047)
DNA (2577bp) protein (859aa)
FtsX-like permease family protein n=2 Tax=Clostridium difficile RepID=T4Q0A4_CLODI
FtsX-like permease family protein {ECO:0000313|EMBL:EQE70100.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
ABC-type transport system, permease
L2_013_000G1_scaffold_78_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29255..30190
DNA (936bp) protein (312aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=2 Tax=Clostridium difficile RepID=T4PZE0_CLODI
Two-component sensor histidine kinase {ECO:0000313|EMBL:CCL23267.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Two-component sensor histidine kinase
L2_013_000G1_scaffold_78_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30209..30946
DNA (738bp) protein (246aa)
Response regulator n=170 Tax=Clostridium difficile RepID=T3II53_CLODC
Two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CCL23268.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_013_000G1_scaffold_78_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31131..36188)
DNA (5058bp) protein (1686aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PZ32_CLODI
uncharacterised protein
Uncharacterised protein {ECO:0000313|EMBL:CEJ96857.1}; Uncharacterized protein {ECO:0000313|EMBL:CKH74036.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_78_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36213..36632)
DNA (420bp) protein (140aa)
Uncharacterized protein n=176 Tax=Clostridium difficile RepID=Q18D86_CLOD6
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77328.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_013_000G1_scaffold_78_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36866..37117)
DNA (252bp) protein (84aa)
Uncharacterized protein n=199 Tax=Clostridium difficile RepID=T3IF19_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77574.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_013_000G1_scaffold_78_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37206..37937
DNA (732bp) protein (244aa)
Uncharacterized protein n=148 Tax=Clostridium difficile RepID=C9XK64_CLODC
hypothetical protein
Flagellin N-methylase family protein {ECO:0000313|EMBL:EQG77974.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Displaying items 1-30 of 129 in total

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