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L2_013_000G1_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_91_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(170..712)
DNA (543bp) protein (181aa)
Flavin reductase n=4 Tax=Lachnospiraceae RepID=A5KNS2_9FIRM
Iron-sulfur flavoprotein {ECO:0000313|EMBL:EFV18291.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Multimeric flavodoxin WrbA
L2_013_000G1_scaffold_91_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(834..2459)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=4 Tax=Lachnospiraceae RepID=A5KNS1_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
chaperonin GroL
L2_013_000G1_scaffold_91_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2511..2798)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=5 Tax=Clostridiales RepID=A5KNS0_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Co-chaperonin GroES (HSP10)
L2_013_000G1_scaffold_91_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3035..3361)
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KNR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25935.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_013_000G1_scaffold_91_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3410..4189)
DNA (780bp) protein (260aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=6 Tax=root RepID=A5KNR7_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Pleiotropic transcriptional repressor
L2_013_000G1_scaffold_91_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4371..6440)
DNA (2070bp) protein (690aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=5 Tax=Clostridiales RepID=A5KNR6_9FIRM
L2_013_000G1_scaffold_91_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6539..7612)
DNA (1074bp) protein (358aa)
DNA protecting protein DprA n=5 Tax=Clostridiales RepID=A5KNR5_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:EDK24003.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
DNA protecting protein DprA
L2_013_000G1_scaffold_91_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7708..9237)
DNA (1530bp) protein (510aa)
Mg chelatase-like protein n=5 Tax=Clostridiales RepID=A5KNR4_9FIRM
Mg chelatase {ECO:0000313|EMBL:EFV18284.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Mg chelatase-related protein
L2_013_000G1_scaffold_91_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9577..10197
DNA (621bp) protein (207aa)
RNA polymerase sigma factor n=4 Tax=Clostridiales RepID=E5XK91_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
RNA polymerase sigma-27/28 subunit,RpsK/SigK
L2_013_000G1_scaffold_91_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10384..10695)
DNA (312bp) protein (104aa)
Plasmid stabilization system protein, RelE/ParE family n=5 Tax=Clostridiales RepID=A5KNR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25929.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
plasmid stabilization system
L2_013_000G1_scaffold_91_11
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10679..10828)
DNA (150bp) protein (50aa)
Prevent-host-death family protein n=5 Tax=Clostridiales RepID=A5KNR0_9FIRM
PHD family Toxin-antitoxin system {ECO:0000313|EMBL:EFV18281.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_013_000G1_scaffold_91_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11202..12806)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=5 Tax=Clostridiales RepID=A5KNQ9_9FIRM
L2_013_000G1_scaffold_91_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13155..14642)
DNA (1488bp) protein (496aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=5 Tax=Clostridiales RepID=E5XK87_9FIRM
Threonine synthase {ECO:0000313|EMBL:EFV18279.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_013_000G1_scaffold_91_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14701..15993)
DNA (1293bp) protein (431aa)
Na+/H+ antiporter family protein n=5 Tax=Clostridiales RepID=A5KNQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25924.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Na+/H+ antiporter
L2_013_000G1_scaffold_91_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16105..16596)
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=5 Tax=Clostridiales RepID=A5KNQ4_9FIRM
L2_013_000G1_scaffold_91_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16593..17927)
DNA (1335bp) protein (445aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
3-isopropylmalate dehydratase large subunit n=5 Tax=Clostridiales RepID=A5KNQ3_9FIRM
3-isopropylmalate dehydratase large subunit
L2_013_000G1_scaffold_91_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17978..19063)
DNA (1086bp) protein (362aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=5 Tax=Clostridiales RepID=A5KNQ2_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CCZ25921.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_013_000G1_scaffold_91_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19196..20584)
DNA (1389bp) protein (463aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=5 Tax=Clostridiales RepID=A5KNQ1_9FIRM
L2_013_000G1_scaffold_91_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20656..21300)
DNA (645bp) protein (215aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KNQ0_9FIRM
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:EFV18273.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_013_000G1_scaffold_91_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21318..22274
DNA (957bp) protein (319aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNP9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDK23987.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_013_000G1_scaffold_91_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22267..23064
DNA (798bp) protein (266aa)
ABC transporter, permease protein n=5 Tax=Clostridiales RepID=A5KNP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81032.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_013_000G1_scaffold_91_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23144..26536)
DNA (3393bp) protein (1131aa)
hsdR; type I restriction enzyme EcoKI R protein HsdR (EC:3.1.21.3)
Type III restriction enzyme, res subunit n=4 Tax=Clostridiales RepID=A5KNP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18270.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_013_000G1_scaffold_91_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26564..27592)
DNA (1029bp) protein (343aa)
Type I restriction modification DNA specificity domain protein n=2 Tax=Clostridiales RepID=A5KNP6_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDK23984.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
restriction endonuclease S subunit
L2_013_000G1_scaffold_91_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27639..28607)
DNA (969bp) protein (323aa)
Phage integrase SAM-like domain protein n=4 Tax=Clostridiales RepID=A5KNP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25550.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Site-specific recombinase XerD
L2_013_000G1_scaffold_91_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28685..29152)
DNA (468bp) protein (156aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KNP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25549.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_013_000G1_scaffold_91_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29152..29613)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KNP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23981.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_013_000G1_scaffold_91_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29743..29955)
DNA (213bp) protein (71aa)
Nucleotidyltransferase substrate-binding family protein n=3 Tax=Clostridiales RepID=A5KNP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25547.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative nucleotidyltransferase substrate binding protein
L2_013_000G1_scaffold_91_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30227..31420)
DNA (1194bp) protein (398aa)
Transposase Int-Tn n=1 Tax=Clostridium difficile P28 RepID=T4NG78_CLODI
Transposase Int-Tn {ECO:0000313|EMBL:EQJ54262.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Site-specific recombinase XerD
L2_013_000G1_scaffold_91_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31501..31704)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NA79_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54263.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
excisionase
L2_013_000G1_scaffold_91_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31910..32119)
DNA (210bp) protein (70aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NG61_CLODI
Helix-turn-helix domain protein {ECO:0000313|EMBL:EQJ54264.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
Displaying items 1-30 of 146 in total

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