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L2_013_000G1_scaffold_110

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_110_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
tuf; translation elongation factor Tu (EC:3.6.5.3)
UPI0003D6803D related cluster n=1 Tax=unknown RepID=UPI0003D6803D
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_013_000G1_scaffold_110_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(126..2210)
DNA (2085bp) protein (695aa)
UPI0003D5AD85 related cluster n=1 Tax=unknown RepID=UPI0003D5AD85
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
translation elongation factor G
L2_013_000G1_scaffold_110_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2229..2699)
DNA (471bp) protein (157aa)
UPI0003D5D650 related cluster n=1 Tax=unknown RepID=UPI0003D5D650
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
30S ribosomal protein S7
L2_013_000G1_scaffold_110_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(2737..3111)
DNA (375bp) protein (125aa)
UPI0003D62E31 related cluster n=1 Tax=unknown RepID=UPI0003D62E31
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
30S ribosomal protein S12
L2_013_000G1_scaffold_110_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3196..3444)
DNA (249bp) protein (83aa)
UPI0003D643D4 related cluster n=1 Tax=unknown RepID=UPI0003D643D4
Ribosomal protein L7Ae/L30e/S12e/Gadd45 {ECO:0000313|EMBL:ETI86392.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
putative ribosomal protein L7Ae-like
L2_013_000G1_scaffold_110_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3697..4284)
DNA (588bp) protein (196aa)
UPI0003D5F078 related cluster n=1 Tax=unknown RepID=UPI0003D5F078
Uncharacterized protein {ECO:0000313|EMBL:ETI86391.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_000G1_scaffold_110_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4338..5822)
DNA (1485bp) protein (495aa)
UPI0003D5978D related cluster n=1 Tax=unknown RepID=UPI0003D5978D
Sodium/proline symporter {ECO:0000313|EMBL:ETI86390.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
sodium/proline symporter
L2_013_000G1_scaffold_110_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(5941..6225)
DNA (285bp) protein (95aa)
UPI0003D62BCC related cluster n=1 Tax=unknown RepID=UPI0003D62BCC
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
50S ribosomal protein L27
L2_013_000G1_scaffold_110_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6230..6547)
DNA (318bp) protein (106aa)
UPI0003D6489C related cluster n=1 Tax=unknown RepID=UPI0003D6489C
Uncharacterized protein {ECO:0000313|EMBL:ETI86388.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_000G1_scaffold_110_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6551..6865)
DNA (315bp) protein (105aa)
UPI0003D699D1 related cluster n=1 Tax=unknown RepID=UPI0003D699D1
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
50S ribosomal protein L21
L2_013_000G1_scaffold_110_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6998..7657)
DNA (660bp) protein (220aa)
UPI0003D5CD90 related cluster n=1 Tax=unknown RepID=UPI0003D5CD90
Uncharacterized protein {ECO:0000313|EMBL:KGF11814.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
nitrogen regulatory protein PII
L2_013_000G1_scaffold_110_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7654..9141)
DNA (1488bp) protein (496aa)
UPI0003D59FA9 related cluster n=1 Tax=unknown RepID=UPI0003D59FA9
Membrane protein {ECO:0000313|EMBL:KGF11815.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L2_013_000G1_scaffold_110_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9263..10243)
DNA (981bp) protein (327aa)
UPI0003D610C2 related cluster n=1 Tax=unknown RepID=UPI0003D610C2
Uncharacterized protein {ECO:0000313|EMBL:ETI88854.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
fhuD; putative iron compound ABC transporter iron compound-binding protein
L2_013_000G1_scaffold_110_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10289..10798)
DNA (510bp) protein (170aa)
UPI0003D62CB5 related cluster n=1 Tax=unknown RepID=UPI0003D62CB5
Flavodoxin family protein {ECO:0000313|EMBL:ETI88855.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
putative flavodoxin family protein
L2_013_000G1_scaffold_110_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10968..11903
DNA (936bp) protein (312aa)
UPI0003D61A6C related cluster n=1 Tax=unknown RepID=UPI0003D61A6C
Uncharacterized protein {ECO:0000313|EMBL:ETI88856.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_013_000G1_scaffold_110_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11951..12424)
DNA (474bp) protein (158aa)
UPI0003D685F2 related cluster n=1 Tax=unknown RepID=UPI0003D685F2
Uncharacterized protein {ECO:0000313|EMBL:ETI87083.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_013_000G1_scaffold_110_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12417..13079)
DNA (663bp) protein (221aa)
UPI0003D64182 related cluster n=1 Tax=unknown RepID=UPI0003D64182
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
GTP-binding protein HSR1-like protein
L2_013_000G1_scaffold_110_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13082..15433)
DNA (2352bp) protein (784aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D6933A related cluster n=1 Tax=unknown RepID=UPI0003D6933A
endopeptidase La
L2_013_000G1_scaffold_110_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15489..16730)
DNA (1242bp) protein (414aa)
UPI0003D5F4F9 related cluster n=1 Tax=unknown RepID=UPI0003D5F4F9
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
L2_013_000G1_scaffold_110_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16740..17348)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5D4B1 related cluster n=1 Tax=unknown RepID=UPI0003D5D4B1
ATP-dependent Clp protease proteolytic subunit
L2_013_000G1_scaffold_110_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17390..18841)
DNA (1452bp) protein (484aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D622D4 related cluster n=1 Tax=unknown RepID=UPI0003D622D4
trigger factor
L2_013_000G1_scaffold_110_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18980..20269)
DNA (1290bp) protein (430aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
serS; seryl-tRNA synthetase (EC:6.1.1.11)
UPI0003D607C4 related cluster n=1 Tax=unknown RepID=UPI0003D607C4
L2_013_000G1_scaffold_110_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20327..20962)
DNA (636bp) protein (212aa)
UPI0003D68E3C related cluster n=1 Tax=unknown RepID=UPI0003D68E3C
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ETI86265.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
phosphoglycerate mutase family protein
L2_013_000G1_scaffold_110_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21037..22113)
DNA (1077bp) protein (359aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D65180 related cluster n=1 Tax=unknown RepID=UPI0003D65180
phosphoserine aminotransferase
L2_013_000G1_scaffold_110_25
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22497..23069)
DNA (573bp) protein (191aa)
UPI0003D59C59 related cluster n=1 Tax=unknown RepID=UPI0003D59C59
Hydrolase {ECO:0000313|EMBL:KGF11826.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
HDIG domain protein
L2_013_000G1_scaffold_110_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23212..24174)
DNA (963bp) protein (321aa)
UPI0003D696B4 related cluster n=1 Tax=unknown RepID=UPI0003D696B4
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
fructose-1
L2_013_000G1_scaffold_110_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24187..24840)
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D674F6 related cluster n=1 Tax=unknown RepID=UPI0003D674F6
transaldolase
L2_013_000G1_scaffold_110_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24892..25026)
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI86270.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_013_000G1_scaffold_110_29
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25145..25714
DNA (570bp) protein (190aa)
UPI0003D60ACA related cluster n=1 Tax=unknown RepID=UPI0003D60ACA
Uncharacterized protein {ECO:0000313|EMBL:KGF11829.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L2_013_000G1_scaffold_110_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(25690..26547)
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5F2C8 related cluster n=1 Tax=unknown RepID=UPI0003D5F2C8
dimethyladenosine transferase
Displaying items 1-30 of 133 in total

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