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L2_013_000G1_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_134_1
unknown

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

L2_013_000G1_scaffold_134_2
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(105..1466)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYX8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHO49846.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
MATE efflux family protein
L2_013_000G1_scaffold_134_3
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1478..2842)
DNA (1365bp) protein (455aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYX9_9FIRM
L2_013_000G1_scaffold_134_4
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2948..3478
DNA (531bp) protein (177aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY0_9FIRM
L2_013_000G1_scaffold_134_5
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3498..4337
DNA (840bp) protein (280aa)
Ribosome biogenesis GTPase A n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY1_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
ribosome biogenesis GTP-binding protein YlqF
L2_013_000G1_scaffold_134_6
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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4344..4988
DNA (645bp) protein (215aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Ribonuclease HII n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY2_9FIRM
rnhB; ribonuclease HII
L2_013_000G1_scaffold_134_7
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4981..5322
DNA (342bp) protein (114aa)
UPF0102 protein HMPREF9099_02701 n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY3_9FIRM
UPF0102 protein HMPREF9099_02701 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
UPF0102 protein
L2_013_000G1_scaffold_134_8
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5319..6170
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY4_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
conserved hypothetical protein TIGR00726
L2_013_000G1_scaffold_134_9
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6254..6559
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO49853.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_000G1_scaffold_134_10
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6576..7856
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XDT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ69328.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
GntR family transcriptional regulator
L2_013_000G1_scaffold_134_11
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7859..9496
DNA (1638bp) protein (546aa)
ABC transporter, ATP-binding protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYZ0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHO49828.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_013_000G1_scaffold_134_12
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9435..10256
DNA (822bp) protein (274aa)
exoA; Exodeoxyribonuclease (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY9_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EHO49827.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_134_13
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10281..12083
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO49826.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
alpha amylase
L2_013_000G1_scaffold_134_14
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12080..12772
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO49825.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_134_15
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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13029..13676
DNA (648bp) protein (216aa)
Peptidase C26 n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYH7_9FIRM
Peptidase C26 {ECO:0000313|EMBL:EHO50162.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
peptidase C26
L2_013_000G1_scaffold_134_16
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13689..14399
DNA (711bp) protein (237aa)
Acyl-ACP thioesterase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYH8_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:EHO50163.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
acyl-ACP thioesterase
L2_013_000G1_scaffold_134_17
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14409..15230
DNA (822bp) protein (274aa)
S1 RNA binding domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYH9_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EHO50164.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
RNA-binding protein
L2_013_000G1_scaffold_134_18
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15280..16269
DNA (990bp) protein (330aa)
SH3 domain protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R996_9FIRM
SH3 domain protein {ECO:0000313|EMBL:EIC96254.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
Bacterial SH3 domain.
L2_013_000G1_scaffold_134_19
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16292..16528)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO50167.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_000G1_scaffold_134_20
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16683..18041
DNA (1359bp) protein (453aa)
Putative potassium transporter peripheral membrane component n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYI3_9FIRM
Putative potassium transporter peripheral membrane component {ECO:0000313|EMBL:EHO50168.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
TrkA-N domain-containing protein
L2_013_000G1_scaffold_134_21
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18041..19489
DNA (1449bp) protein (483aa)
Cation transport protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYI4_9FIRM
Cation transport protein {ECO:0000313|EMBL:EHO50169.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
cation transporter
L2_013_000G1_scaffold_134_22
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19573..20643
DNA (1071bp) protein (357aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
ABC transporter, ATP-binding protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSX1_9FIRM
ABC transporter
L2_013_000G1_scaffold_134_23
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20600..21280
DNA (681bp) protein (227aa)
Putative D-methionine transport system permease protein MetI n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSX2_9FIRM
Putative D-methionine transport system permease protein MetI {ECO:0000313|EMBL:EHO53879.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
ABC-type metal ion transport system, permease component
L2_013_000G1_scaffold_134_24
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21340..22236
DNA (897bp) protein (299aa)
Lipoprotein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R982_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L2_013_000G1_scaffold_134_25
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22618..23385
DNA (768bp) protein (256aa)
ThiF family protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSX4_9FIRM
ThiF family protein {ECO:0000313|EMBL:EHO53881.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
UBA/THIF-type NAD/FAD binding protein
L2_013_000G1_scaffold_134_26
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23382..24779
DNA (1398bp) protein (466aa)
Amino acid carrier protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSX5_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EHO53882.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
amino acid carrier protein
L2_013_000G1_scaffold_134_27
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24858..25166
DNA (309bp) protein (103aa)
Thioredoxin n=2 Tax=Lachnospiraceae RepID=E6LS42_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
trxA; putative thioredoxin
L2_013_000G1_scaffold_134_28
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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25185..26135
DNA (951bp) protein (317aa)
Putative thioredoxin-disulfide reductase n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LS41_9FIRM
Putative thioredoxin-disulfide reductase {ECO:0000313|EMBL:EFU75418.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
TrxB; thioredoxin reductase
L2_013_000G1_scaffold_134_29
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26159..26704
DNA (546bp) protein (182aa)
glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSX8_9FIRM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_134_30
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26787..27230
DNA (444bp) protein (148aa)
Putative organic hydroperoxide resistance transcriptional regulator n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSX9_9FIRM
Putative organic hydroperoxide resistance transcriptional regulator {ECO:0000313|EMBL:EHO53886.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
MarR family transcriptional regulator
Displaying items 1-30 of 122 in total

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