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L2_013_000G1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_200_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1416
DNA (1416bp) protein (472aa)
FG-GAP repeat protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VAV7_9CLOT
FG-GAP repeat protein {ECO:0000313|EMBL:EDO58960.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L2_013_000G1_scaffold_200_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1756..3120)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35626.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_200_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3147..4394)
DNA (1248bp) protein (416aa)
Amidohydrolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXH1_9CLOT
Amidohydrolase {ECO:0000313|EMBL:EOQ35627.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
peptidase M20
L2_013_000G1_scaffold_200_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4715..6316
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35628.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
amidohydrolase
L2_013_000G1_scaffold_200_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6380..7474
DNA (1095bp) protein (365aa)
TIGR00300 family protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT21_9CLOT
TIGR00300 family protein {ECO:0000313|EMBL:EOQ35629.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_000G1_scaffold_200_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7474..8190
DNA (717bp) protein (239aa)
Branched-chain amino acid transporter AzlC n=1 Tax=Dorea sp. 5-2 RepID=R9NF98_9FIRM
Branched-chain amino acid transporter AzlC {ECO:0000313|EMBL:EOS81616.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
branched-chain amino acid transporter AzlC
L2_013_000G1_scaffold_200_7
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8187..8513
DNA (327bp) protein (109aa)
branched-chain amino acid transporter AzlD n=1 Tax=Blautia producta RepID=UPI000364AAD8
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:EFV02221.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
azlD; branched-chain amino acid transporter
L2_013_000G1_scaffold_200_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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8668..9723
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWY6_9FIRM
L2_013_000G1_scaffold_200_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9716..10420
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZZ9_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC29130.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_000G1_scaffold_200_10
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10465..11763
DNA (1299bp) protein (433aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E4S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83772.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L2_013_000G1_scaffold_200_11
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11778..12467
DNA (690bp) protein (230aa)
K+ transport systems NAD-binding component n=1 Tax=Roseburia sp. CAG:303 RepID=R7IM61_9FIRM
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CDE52675.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
K+ transport systems, NAD-binding component
L2_013_000G1_scaffold_200_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12644..14275
DNA (1632bp) protein (544aa)
Na/Pi-cotransporter n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRF7_9CLOT
Na/Pi-cotransporter {ECO:0000313|EMBL:CDD38543.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Na/Pi-cotransporter
L2_013_000G1_scaffold_200_13
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14400..14789)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AFR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ26846.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
CopY family transcriptional regulator
L2_013_000G1_scaffold_200_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14991..16613
DNA (1623bp) protein (541aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ53_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_013_000G1_scaffold_200_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16618..17334
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71054.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
two component transcriptional regulator
L2_013_000G1_scaffold_200_16
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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17498..18220
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71053.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L2_013_000G1_scaffold_200_17
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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18321..19244
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71053.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_013_000G1_scaffold_200_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19399..20805
DNA (1407bp) protein (469aa)
Potassium transporter peripheral membrane component n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKS7_9FIRM
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:CCY13156.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
K+ transport systems, NAD-binding component
L2_013_000G1_scaffold_200_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20798..22288
DNA (1491bp) protein (497aa)
Cation transport protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GK21_9FIRM
Cation transport protein {ECO:0000313|EMBL:CCY13157.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
trkH2; Trk system potassium uptake protein TrkH
L2_013_000G1_scaffold_200_20
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22338..23207
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MN33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72455.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Predicted membrane protein
L2_013_000G1_scaffold_200_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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23363..25621
DNA (2259bp) protein (753aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AJU0_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHQ47045.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
diguanylate cyclase (GGDEF) domain
L2_013_000G1_scaffold_200_22
unknown

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25677..25838
DNA (162bp) protein (54aa)

This feature has no annotations

L2_013_000G1_scaffold_200_23
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25953..26165
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QWY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42173.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L2_013_000G1_scaffold_200_24
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26241..26477
DNA (237bp) protein (79aa)
FeoA domain protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JTX5_9CLOT
FeoA domain protein {ECO:0000313|EMBL:CCY57988.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
ferrous iron transport protein A
L2_013_000G1_scaffold_200_25
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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26584..28767
DNA (2184bp) protein (728aa)
Ferrous iron transporter B n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AK21_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:EGG87143.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ferrous iron transport protein B
L2_013_000G1_scaffold_200_26
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28757..29083
DNA (327bp) protein (109aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUE8_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CDF42177.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Fe2+/Zn2+ uptake regulation proteins
L2_013_000G1_scaffold_200_27
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29324..30742
DNA (1419bp) protein (473aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Roseburia sp. CAG:50 RepID=R5TET4_9FIRM
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:CCZ64160.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
iron-only hydrogenase maturation protein HydF
L2_013_000G1_scaffold_200_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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30963..31325
DNA (363bp) protein (121aa)
Hpt domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWF9_9FIRM
Hpt domain.
Hpt domain {ECO:0000313|EMBL:CBL11699.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_013_000G1_scaffold_200_29
unknown

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31347..31544
DNA (198bp) protein (66aa)

This feature has no annotations

L2_013_000G1_scaffold_200_30
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31523..32128
DNA (606bp) protein (202aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BI71_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EMZ36524.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
ECF subfamily RNA polymerase sigma-24 subunit
Displaying items 1-30 of 93 in total

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