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L2_013_000G1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_220_1
unknown

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134..295
DNA (162bp) protein (54aa)

This feature has no annotations

L2_013_000G1_scaffold_220_2
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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523..1152
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=root RepID=R6BW27_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA65204.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_220_3
Prevotella denticola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1121..2137
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Prevotella salivae DSM 15606 RepID=E6MTM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGF41373.1}; TaxID=1401077 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella denticola DNF00960.;"
hypothetical protein
L2_013_000G1_scaffold_220_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2311..3273
DNA (963bp) protein (321aa)
Bacteroidetes-specific putative membrane protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG30_9BACT
Bacteroidetes-specific putative membrane protein {ECO:0000313|EMBL:EFB34469.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Bacteroidetes-specific putative membrane protein
L2_013_000G1_scaffold_220_5
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3312..4772
DNA (1461bp) protein (487aa)
Putative gliding motility-associated lipoprotein GldK n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG29_9BACT
Putative gliding motility-associated lipoprotein GldK {ECO:0000313|EMBL:EFB34468.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_220_6
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4778..5509
DNA (732bp) protein (244aa)
Gliding motility-associated protein GldL n=3 Tax=root RepID=D1PG28_9BACT
Gliding motility-associated protein GldL {ECO:0000313|EMBL:EFB34467.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
gldL; gliding motility-associated protein GldL
L2_013_000G1_scaffold_220_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5549..6634
DNA (1086bp) protein (362aa)
GldM family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BVM0_9BACT
GldM family protein {ECO:0000313|EMBL:CDA67315.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
gliding motility-associated protein GldM
L2_013_000G1_scaffold_220_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6721..7779
DNA (1059bp) protein (353aa)
Gliding motility-associated protein GldN n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG26_9BACT
Gliding motility-associated protein GldN {ECO:0000313|EMBL:EFB34465.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
gliding motility associated protein GldN
L2_013_000G1_scaffold_220_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7808..8419
DNA (612bp) protein (204aa)
Signal peptide YSIRK family n=1 Tax=Prevotella copri CAG:164 RepID=R6BT68_9BACT
Signal peptide YSIRK family {ECO:0000313|EMBL:CDA67313.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_220_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8591..10861
DNA (2271bp) protein (757aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Primosomal protein N n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG24_9BACT
primosomal protein N''
L2_013_000G1_scaffold_220_11
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10987..12567)
DNA (1581bp) protein (527aa)
Putative outer membrane protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PTC5_9BACT
Putative outer membrane protein {ECO:0000313|EMBL:CDC23994.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
long-chain fatty acid transport protein
L2_013_000G1_scaffold_220_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12786..14885)
DNA (2100bp) protein (700aa)
7TM receptor with intracellular HD hydrolase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG22_9BACT
7TM receptor with intracellular HD hydrolase {ECO:0000313|EMBL:EFB34461.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
HDIG domain-containing protein
L2_013_000G1_scaffold_220_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15004..16521
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Prevotella copri CAG:164 RepID=R6BRX7_9BACT
L2_013_000G1_scaffold_220_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16623..17885
DNA (1263bp) protein (421aa)
Putative 3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Prevotella copri CAG:164 RepID=R6C0X1_9BACT
Putative 3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CDA66884.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
glycosyl transferase
L2_013_000G1_scaffold_220_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17988..18512)
DNA (525bp) protein (175aa)
Oxygen-insensitive NAD(P)H nitroreductase n=1 Tax=Prevotella copri CAG:164 RepID=R6BUG0_9BACT
Oxygen-insensitive NAD(P)H nitroreductase {ECO:0000313|EMBL:CDA66885.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
nitroreductase
L2_013_000G1_scaffold_220_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18566..19768)
DNA (1203bp) protein (401aa)
Hemolysin n=1 Tax=Prevotella copri CAG:164 RepID=R6C615_9BACT
Hemolysin {ECO:0000313|EMBL:CDA66886.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
L2_013_000G1_scaffold_220_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20032..20886)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6CNQ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66887.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Protein of unknown function (DUF3737)
L2_013_000G1_scaffold_220_18
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21106..22098)
DNA (993bp) protein (331aa)
Lactate/malate dehydrogenase, NAD binding domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG16_9BACT
Lactate/malate dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:EFB34455.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
lactate/malate dehydrogenase, NAD binding domain-containing protein
L2_013_000G1_scaffold_220_19
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22346..24133
DNA (1788bp) protein (596aa)
M24B subfamily peptidase (EC:3.4.-.-)
Creatinase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG15_9BACT
Creatinase {ECO:0000313|EMBL:EFB34454.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L2_013_000G1_scaffold_220_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24269..24460
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=4 Tax=Prevotella RepID=D1PG14_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rpsU; 30S ribosomal protein S21
L2_013_000G1_scaffold_220_21
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24541..25425
DNA (885bp) protein (295aa)
Tyrosine recombinase XerC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG13_9BACT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
site-specific recombinase XerD
L2_013_000G1_scaffold_220_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25449..25748
DNA (300bp) protein (100aa)
Ribosomal subunit interface protein n=3 Tax=root RepID=D1PG12_9BACT
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDA66892.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
yfiA; ribosomal subunit interface protein
L2_013_000G1_scaffold_220_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26265..27461
DNA (1197bp) protein (399aa)
Elongation factor Tu n=1 Tax=Prevotella copri CAG:164 RepID=R6BRY6_9BACT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
tuf; translation elongation factor Tu
L2_013_000G1_scaffold_220_24

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27614..27802
DNA (189bp) protein (63aa)
Protein translocase subunit SecE n=2 Tax=root RepID=D1PG10_9BACT
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:EKC62482.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
secE; preprotein translocase, SecE subunit
L2_013_000G1_scaffold_220_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27815..28357
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=3 Tax=root RepID=D1PG09_9BACT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
transcription termination/antitermination factor NusG
L2_013_000G1_scaffold_220_26
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28416..28856
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=2 Tax=Prevotella RepID=D1PG08_9BACT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
50S ribosomal protein L11
L2_013_000G1_scaffold_220_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28878..29570
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Prevotella copri CAG:164 RepID=R6C625_9BACT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rplA; 50S ribosomal protein L1
L2_013_000G1_scaffold_220_28
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


29589..30107
DNA (519bp) protein (173aa)
Ribosomal protein L10 n=1 Tax=Prevotella copri CAG:164 RepID=R6CNR2_9BACT
Ribosomal protein L10 {ECO:0000313|EMBL:CDA66897.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rplJ; ribosomal protein L10
L2_013_000G1_scaffold_220_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


30164..30541
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Prevotella RepID=D1PG05_9BACT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
50S ribosomal protein L7/L12
L2_013_000G1_scaffold_220_30
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30652..34464
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
DNA-directed RNA polymerase subunit beta n=3 Tax=root RepID=R6C0Z3_9BACT
DNA-directed RNA polymerase subunit beta
Displaying items 1-30 of 94 in total

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