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L2_013_000G1_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_276_1
Melampsora larici-populina, Melampsora, Pucciniales, Pucciniomycetes, Basidiomycota, Fungi

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1..120
DNA (120bp) protein (40aa)
Putative uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) RepID=F4RC50_MELLP
Putative uncharacterized protein {ECO:0000313|EMBL:EGG10217.1}; TaxID=747676 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora.;" source="Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) (Poplar; leaf rust fungus).;"
L2_013_000G1_scaffold_276_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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222..1244
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T2XGA2_CLODI
Putative membrane protein {ECO:0000313|EMBL:CDS95574.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative membrane protein
L2_013_000G1_scaffold_276_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1495..3522
DNA (2028bp) protein (676aa)
cwp6; putative N-acetylmuramoyl-L-alanineamidase,autolysin cwp6 (EC:3.5.1.28)
Putative N-acetylmuramoyl-L-alanine amidase,autolysin cwp6 {ECO:0000313|EMBL:CAJ69672.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CAJ69672.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N-acetylmuramoyl-L-alanine amidase family protein n=2 Tax=Clostridium difficile RepID=T4PGC4_CLODI
L2_013_000G1_scaffold_276_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3742..4428
DNA (687bp) protein (229aa)
Bacterial sugar transferase family protein n=2 Tax=Clostridium difficile RepID=T4PGG1_CLODI
glycosyltransferase
Putative glycosyl transferase {ECO:0000313|EMBL:CCL31060.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_000G1_scaffold_276_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4523..5578
DNA (1056bp) protein (352aa)
Cell wall binding repeat 2 family protein n=158 Tax=Clostridium difficile RepID=T2TF74_CLODI
Cell wall binding protein {ECO:0000313|EMBL:CDS95592.1}; Putative cell wall binding repeat 2 {ECO:0000313|EMBL:CDS89121.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
cwp7; Cell wall binding protein cwp7
L2_013_000G1_scaffold_276_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5693..7249
DNA (1557bp) protein (519aa)
Transmembrane virulence factor, MviN family protein n=161 Tax=Clostridium difficile RepID=Q183L8_CLOD6
mviN; Transmembrane virulence factor, MviN familyprotein
Transmembrane virulence factor, MviN family protein {ECO:0000313|EMBL:CAJ69669.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_013_000G1_scaffold_276_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7295..9001
DNA (1707bp) protein (569aa)
pgmA; Alpha-phosphoglucomutase (EC:5.4.2.2)
Alpha-phosphoglucomutase {ECO:0000313|EMBL:CAJ69668.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CAJ69668.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Phosphoglucomutase/phosphomannomutase, C-terminal domain protein n=92 Tax=Clostridium difficile RepID=T3GA36_CLODC
L2_013_000G1_scaffold_276_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9023..10096
DNA (1074bp) protein (358aa)
manC; putative mannose-1-phosphateguanylyltransferase (EC:2.7.7.22)
Nucleotidyl transferase family protein n=196 Tax=Clostridium difficile RepID=T3GBR2_CLODC
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EHJ33198.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_013_000G1_scaffold_276_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10108..10830
DNA (723bp) protein (241aa)
Uncharacterized protein n=143 Tax=Clostridium difficile RepID=G6B4K5_CLODI
polysaccharide biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ33197.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_013_000G1_scaffold_276_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10846..12003
DNA (1158bp) protein (386aa)
Putative membrane protein n=2 Tax=Clostridium difficile RepID=T4PAJ7_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:EQG74118.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_013_000G1_scaffold_276_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12006..12845
DNA (840bp) protein (280aa)
Glycosyl transferase 2 family protein n=192 Tax=Clostridium difficile RepID=T3GBV9_CLODC
putative glycosyl transferase, family 2
Putative glycosyl transferase, family 2 {ECO:0000313|EMBL:CCL23141.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_013_000G1_scaffold_276_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12860..14035
DNA (1176bp) protein (392aa)
Poly(Glycerophosphate) glycerophosphotransferase family protein n=156 Tax=Clostridium difficile RepID=T3GE80_CLODC
minor teichoic acid biosynthesis protein
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:CDS89108.1}; Putative glycerophosphotransferase {ECO:0000313|EMBL:CDS88437.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_000G1_scaffold_276_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14064..14813
DNA (750bp) protein (250aa)
family 2 glycosyl transferase (EC:2.4.1.-)
Putative glycosyl transferase, family 2 {ECO:0000313|EMBL:CCK99267.1}; EC=2.4.1.- {ECO:0000313|EMBL:CCK99267.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Glycosyl transferase 2 family protein n=192 Tax=Clostridium difficile RepID=T3GDJ6_CLODC
L2_013_000G1_scaffold_276_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14835..15743
DNA (909bp) protein (303aa)
Glycosyl transferase 2 family protein n=190 Tax=Clostridium difficile RepID=C9XP77_CLODC
beta-glycosyltransferase
Putative glycosyl transferase, family 2 {ECO:0000313|EMBL:CCL31050.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_000G1_scaffold_276_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15791..16543
DNA (753bp) protein (251aa)
Putative glycosyl transferase, family 2 {ECO:0000313|EMBL:CCL31049.1}; EC=2.4.1.- {ECO:0000313|EMBL:CCL31049.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Glycosyl transferase 2 family protein n=206 Tax=Clostridium difficile RepID=C9XP76_CLODC
teichuronic acid biosynthesis glycosyl transferase
L2_013_000G1_scaffold_276_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16497..17864
DNA (1368bp) protein (456aa)
Nucleotide sugar dehydrogenase n=2 Tax=Clostridium difficile RepID=G6BF58_CLODI
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EHJ32697.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
putative UDP-glucose 6-dehydrogenase
L2_013_000G1_scaffold_276_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17870..18961
DNA (1092bp) protein (364aa)
Glycosyl transferases group 1 family protein n=183 Tax=Clostridium difficile RepID=C9XP74_CLODC
capsular polysaccharide biosynthesis glycosyl transferase
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EQE60225.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_000G1_scaffold_276_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19045..20958
DNA (1914bp) protein (638aa)
Short chain dehydrogenase family protein n=56 Tax=Clostridium difficile RepID=T2WM95_CLODI
putative polysaccharide biosynthesis protein
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:CAJ69657.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_013_000G1_scaffold_276_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21160..21864
DNA (705bp) protein (235aa)
NlpC/P60 family protein n=105 Tax=Clostridium difficile RepID=G6BF61_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE60249.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative cell-wall hydrolase
L2_013_000G1_scaffold_276_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22166..24277
DNA (2112bp) protein (704aa)
Melibiase family protein n=132 Tax=Clostridium difficile RepID=T3GA68_CLODC
cwp19; Cell surface protein cwp19
Cell surface protein cwp19 {ECO:0000313|EMBL:CAJ69655.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_013_000G1_scaffold_276_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24475..25440)
DNA (966bp) protein (322aa)
Transcriptional regulator, LytR family n=78 Tax=Clostridium difficile RepID=Q183K3_CLOD6
penicillin-binding protein repressor
Transcriptional regulator, LytR family {ECO:0000313|EMBL:CAJ69654.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_013_000G1_scaffold_276_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25725..26681)
DNA (957bp) protein (319aa)
Cell envelope-related function transcriptional attenuator common domain protein n=131 Tax=Clostridium difficile RepID=T3GEB3_CLODC
Cell envelope-related function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EQE60226.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
penicillin-binding protein repressor
L2_013_000G1_scaffold_276_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27049..27837
DNA (789bp) protein (263aa)
Putative hydrolase, HAD superfamily, IIB subfamily {ECO:0000313|EMBL:CCL23128.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCL23128.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
HAD hydrolase, IIB family protein n=2 Tax=Clostridium difficile RepID=T4PGA4_CLODI
hydrolase
L2_013_000G1_scaffold_276_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27960..28430)
DNA (471bp) protein (157aa)
Uncharacterized protein n=205 Tax=Clostridium difficile RepID=T2TAN8_CLODI
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EQE60286.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_000G1_scaffold_276_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28569..29213
DNA (645bp) protein (215aa)
Putative undecaprenyl pyrophosphate synthetase {ECO:0000313|EMBL:CCK99255.1}; EC=2.5.1.31 {ECO:0000313|EMBL:CCK99255.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Undecaprenyl pyrophosphate synthetase n=205 Tax=Clostridium difficile RepID=C9XP66_CLODC
UDP pyrophosphate synthetase
L2_013_000G1_scaffold_276_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29337..30161
DNA (825bp) protein (275aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase family protein n=118 Tax=Clostridium difficile RepID=T3GBZ1_CLODC
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EQE60314.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_000G1_scaffold_276_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30476..32023
DNA (1548bp) protein (516aa)
Diguanylate cyclase domain protein n=14 Tax=Clostridium difficile RepID=T2UN59_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQI79217.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
putative signaling protein
L2_013_000G1_scaffold_276_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32026..32424
DNA (399bp) protein (133aa)
Transcriptional regulator family protein n=207 Tax=Clostridium difficile RepID=C9XP63_CLODC
hypothetical protein
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:CCL31030.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_000G1_scaffold_276_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32464..34197
DNA (1734bp) protein (578aa)
putative N6 adenine-specific DNAmethyltransferase, N12 class (EC:2.1.1.72)
Eco57I restriction endonuclease n=155 Tax=Clostridium difficile RepID=G6BF72_CLODI
Eco57I restriction-modification methylase family protein {ECO:0000313|EMBL:EQG74156.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_013_000G1_scaffold_276_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34429..35640
DNA (1212bp) protein (404aa)
Patatin-like phospholipase family protein n=136 Tax=Clostridium difficile RepID=C9XP61_CLODC
phospholipase
Patatin-like phospholipase family protein {ECO:0000313|EMBL:EQE60241.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Displaying items 1-30 of 70 in total

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