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L2_013_000G1_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_277_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..344
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP23078.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_013_000G1_scaffold_277_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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359..1759
DNA (1401bp) protein (467aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEI4_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFQ08418.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phage integrase family.
L2_013_000G1_scaffold_277_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2117..2992)
DNA (876bp) protein (292aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEU98279.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEU98279.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1R9_9FIRM
L2_013_000G1_scaffold_277_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2996..3679)
DNA (684bp) protein (228aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EEU98280.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEU98280.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S0_9FIRM
L2_013_000G1_scaffold_277_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3864..5165
DNA (1302bp) protein (434aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Trigger factor n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S1_9FIRM
trigger factor
L2_013_000G1_scaffold_277_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5240..6019)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98282.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted permeases
L2_013_000G1_scaffold_277_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6021..6464)
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S3_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEU98283.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, MarR family
L2_013_000G1_scaffold_277_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6604..8949)
DNA (2346bp) protein (782aa)
Ferrous iron transport protein B n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S4_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:EEU98284.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ferrous iron transporter FeoB
L2_013_000G1_scaffold_277_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9102..10127)
DNA (1026bp) protein (342aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEU98286.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEU98286.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S6_9FIRM
L2_013_000G1_scaffold_277_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10389..11462)
DNA (1074bp) protein (358aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Galactose mutarotase and related enzymes (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S8_9FIRM
L2_013_000G1_scaffold_277_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11716..15651)
DNA (3936bp) protein (1312aa)
Cation/multidrug efflux pump n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R387_9FIRM
Cation/multidrug efflux pump {ECO:0000313|EMBL:CDC28812.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Cation/multidrug efflux pump
L2_013_000G1_scaffold_277_12
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15943..16881
DNA (939bp) protein (313aa)
PSP1 C-terminal domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q733_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDC28814.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Uncharacterized homolog of PSP1
L2_013_000G1_scaffold_277_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17474..18151
DNA (678bp) protein (226aa)
Predicted O-methyltransferase n=2 Tax=root RepID=D4JZE2_9FIRM
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBK99391.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_013_000G1_scaffold_277_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18170..19021
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T8_9FIRM
conserved hypothetical protein TIGR00096
L2_013_000G1_scaffold_277_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19044..19532
DNA (489bp) protein (163aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Putative metallophosphoesterase (EC:3.1.4.-)
Phosphodiesterase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T9_9FIRM
L2_013_000G1_scaffold_277_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19529..20296
DNA (768bp) protein (256aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZ32_9FIRM
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:CDC28825.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_013_000G1_scaffold_277_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20600..21148)
DNA (549bp) protein (183aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U1_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEU98301.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L2_013_000G1_scaffold_277_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21257..22231
DNA (975bp) protein (325aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZE8_9FIRM
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBK99397.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_013_000G1_scaffold_277_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22257..23543
DNA (1287bp) protein (429aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U2_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEU98302.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_013_000G1_scaffold_277_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23585..24547)
DNA (963bp) protein (321aa)
DNA polymerase III, delta' subunit family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U3_9FIRM
DNA polymerase III, delta' subunit family protein {ECO:0000313|EMBL:EEU98303.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_013_000G1_scaffold_277_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24581..25219)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98304.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Rhomboid family.
L2_013_000G1_scaffold_277_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25804..27375)
DNA (1572bp) protein (524aa)
Magnesium transporter n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q762_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Mg2+ transporter (mgtE)
L2_013_000G1_scaffold_277_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28337..31882)
DNA (3546bp) protein (1182aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V2_9FIRM
L2_013_000G1_scaffold_277_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32251..32802
DNA (552bp) protein (184aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
Hydrolase, NUDIX family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V5_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEU98314.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_013_000G1_scaffold_277_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32799..33485
DNA (687bp) protein (229aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EEU98316.1}; EC=5.4.99.- {ECO:0000313|EMBL:EEU98316.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V6_9FIRM
pseudouridine synthase
L2_013_000G1_scaffold_277_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33571..34254
DNA (684bp) protein (228aa)
Transcriptional regulator GntR family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PUF5_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDC27170.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Transcriptional regulators
L2_013_000G1_scaffold_277_27
unknown

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comp(34373..34972)
DNA (600bp) protein (200aa)

This feature has no annotations

L2_013_000G1_scaffold_277_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35313..35894)
DNA (582bp) protein (194aa)
Putative manganese efflux pump MntP n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V8_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted membrane protein
L2_013_000G1_scaffold_277_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(36222..38795)
DNA (2574bp) protein (858aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V9_9FIRM
L2_013_000G1_scaffold_277_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38951..40945)
DNA (1995bp) protein (665aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q638_9FIRM
Displaying items 1-30 of 73 in total

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