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L2_013_000G1_scaffold_284

Search features with annotation key words

Displaying items 1-30 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_284_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..157
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y4C0_9CLOT
putative zinc-binding domain protein
Cytochrome C551 {ECO:0000313|EMBL:KJU71042.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_000G1_scaffold_284_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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282..1406
DNA (1125bp) protein (375aa)
Family 2 glycosyl transferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BY47_9CLOT
glycosyl transferase 2 family protein
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:AIY83868.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_284_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1534..3447
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WHV9_9CLOT
Collagen triple helix repeat family protein {ECO:0000313|EMBL:AIY82910.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
collagen triple helix repeat family protein
L2_013_000G1_scaffold_284_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3600..5030
DNA (1431bp) protein (477aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916, ECO:0000313|EMBL:AIY84691.1}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
phospholipase D n=1 Tax=Clostridium botulinum RepID=UPI0002F0659C
cls; cardiolipin synthase
L2_013_000G1_scaffold_284_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5356..6369
DNA (1014bp) protein (338aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AIY83216.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AIY83216.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FLM8_9CLOT
L2_013_000G1_scaffold_284_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6412..7464
DNA (1053bp) protein (351aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
3-dehydroquinate synthase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSJ5_9CLOT
L2_013_000G1_scaffold_284_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7480..8766
DNA (1287bp) protein (429aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y4B2_9CLOT
L2_013_000G1_scaffold_284_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8744..9826
DNA (1083bp) protein (361aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Chorismate synthase n=1 Tax=Clostridium colicanis 209318 RepID=N9WHV3_9CLOT
L2_013_000G1_scaffold_284_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9826..10965
DNA (1140bp) protein (380aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase {ECO:0000313|EMBL:AIY84851.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AIY84851.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Chorismate mutase n=1 Tax=Clostridium colicanis 209318 RepID=N9WIC0_9CLOT
L2_013_000G1_scaffold_284_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10965..11768
DNA (804bp) protein (268aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Shikimate dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3B3_9CLOT
L2_013_000G1_scaffold_284_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11795..12307
DNA (513bp) protein (171aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Shikimate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSI9_9CLOT
shikimate kinase family protein
L2_013_000G1_scaffold_284_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12313..12738
DNA (426bp) protein (142aa)
aroQ; 3-dehydroquinate dehydratase, type II (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
3-dehydroquinate dehydratase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUY4_9CLOT
L2_013_000G1_scaffold_284_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12833..13846
DNA (1014bp) protein (338aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AIY85073.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AIY85073.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium colicanis 209318 RepID=N9WIB4_9CLOT
L2_013_000G1_scaffold_284_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13875..14708
DNA (834bp) protein (278aa)
Prephenate dehydrogenase n=2 Tax=Clostridium botulinum B RepID=B2TQ45_CLOBB
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein {ECO:0000313|EMBL:AIY82405.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_284_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15010..19227
DNA (4218bp) protein (1406aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002E78789
F5/8 type C domain protein {ECO:0000313|EMBL:AIY84741.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
F5/8 type C domain protein
L2_013_000G1_scaffold_284_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19364..25612
DNA (6249bp) protein (2083aa)
Putative Beta galactosidase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETJ2_9CLOT
LPXTG cell wall anchor domain protein {ECO:0000313|EMBL:AIY82906.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
LPXTG cell wall anchor domain protein
L2_013_000G1_scaffold_284_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25997..27280
DNA (1284bp) protein (428aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
PTS system lactose/cellobiose family IIC subunit n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EYN4_CLOSG
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_284_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27446..29086
DNA (1641bp) protein (547aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hydroxylamine reductase n=1 Tax=Clostridium tunisiense RepID=UPI0002E19382
hcp; hydroxylamine reductase
L2_013_000G1_scaffold_284_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29100..29222
DNA (123bp) protein (41aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83564.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_284_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29253..29795)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3A0_9CLOT
Adenylate cyclase {ECO:0000313|EMBL:KJU71027.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
CYTH domain protein
L2_013_000G1_scaffold_284_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30018..31625
DNA (1608bp) protein (536aa)
Na/Pi-cotransporter family protein/PhoU family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CH66_9CLOT
na+/Pi-cotransporter family protein
Na+/Pi-cotransporter family protein {ECO:0000313|EMBL:AIY82823.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_284_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31764..32801
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Y0_9CLOT
37-kD nucleoid-associated bacterial family protein
37-kD nucleoid-associated bacterial family protein {ECO:0000313|EMBL:AIY84231.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_284_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32901..33821)
DNA (921bp) protein (307aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y494_9CLOT
L2_013_000G1_scaffold_284_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33841..34998)
DNA (1158bp) protein (386aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
argD; acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine and succinylornithine aminotransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2P6_9CLOT
L2_013_000G1_scaffold_284_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35016..35876)
DNA (861bp) protein (287aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375, ECO:0000313|EMBL:AIY84339.1}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383, ECO:0000313|EMBL:AIY84339.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Acetylglutamate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9WIA0_9CLOT
L2_013_000G1_scaffold_284_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35894..37102)
DNA (1209bp) protein (403aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35)
ornithine acetyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002E64378
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_284_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37128..38165)
DNA (1038bp) protein (346aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSG9_9CLOT
L2_013_000G1_scaffold_284_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38180..39580)
DNA (1401bp) protein (467aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Argininosuccinate lyase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y488_9CLOT
L2_013_000G1_scaffold_284_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39599..40819)
DNA (1221bp) protein (407aa)
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Argininosuccinate synthase n=1 Tax=Clostridium colicanis 209318 RepID=N9WHT2_9CLOT
L2_013_000G1_scaffold_284_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41050..41355
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WDV8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71017.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Displaying items 1-30 of 236 in total

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