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L2_013_000G1_scaffold_350

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Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_350_1
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(274..2466)
DNA (2193bp) protein (731aa)
Alpha-amylase family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C5A5_9BACT
Alpha-amylase family protein {ECO:0000313|EMBL:CDA66626.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
alpha amylase catalytic domain-containing protein
L2_013_000G1_scaffold_350_2
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2557..3444)
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Prevotella copri CAG:164 RepID=R6CMY8_9BACT
malonyl CoA-acyl carrier protein transacylase
L2_013_000G1_scaffold_350_3
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3729..4259)
DNA (531bp) protein (177aa)
50S ribosomal protein L9 n=2 Tax=Prevotella RepID=D1PBV7_9BACT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rplI; ribosomal protein L9
L2_013_000G1_scaffold_350_4
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4280..4549)
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=2 Tax=Prevotella RepID=D1PBV6_9BACT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rpsR; 30S ribosomal protein S18
L2_013_000G1_scaffold_350_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4552..4896)
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=2 Tax=Prevotella RepID=D1PBV5_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rpsF; 30S ribosomal protein S6
L2_013_000G1_scaffold_350_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5086..5283
DNA (198bp) protein (66aa)
Quinolinate synthetase A n=1 Tax=Prevotella copri CAG:164 RepID=R6C5B2_9BACT
Quinolinate synthetase A {ECO:0000313|EMBL:CDA66631.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L2_013_000G1_scaffold_350_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5344..6042)
DNA (699bp) protein (233aa)
Transcriptional regulatory protein RprY n=3 Tax=root RepID=D1PBV3_9BACT
DNA-binding response regulator RprY {ECO:0000313|EMBL:CDA66632.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
transcriptional regulatory protein rprY
L2_013_000G1_scaffold_350_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6102..7595)
DNA (1494bp) protein (498aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=root RepID=D1PBV2_9BACT
signal transduction histidine kinase
L2_013_000G1_scaffold_350_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7661..7777)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C053_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66634.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L2_013_000G1_scaffold_350_10
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7833..9995)
DNA (2163bp) protein (721aa)
Translation elongation factor G n=3 Tax=root RepID=D1PBV1_9BACT
Translation elongation factor G {ECO:0000313|EMBL:CDA66635.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
putative translation elongation factor G
L2_013_000G1_scaffold_350_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10223..11359
DNA (1137bp) protein (379aa)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Prevotella copri CAG:164 RepID=R6C5B8_9BACT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDA66636.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
putative oxygen-independent coproporphyrinogen III oxidase
L2_013_000G1_scaffold_350_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11390..11761)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=root RepID=D1PBU8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35774.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_350_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12030..13376)
DNA (1347bp) protein (449aa)
Citrate synthase n=2 Tax=root RepID=D1PBU7_9BACT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
citrate synthase
L2_013_000G1_scaffold_350_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13411..15669)
DNA (2259bp) protein (753aa)
Putative aconitate hydratase 2 n=1 Tax=Prevotella copri CAG:164 RepID=R6C058_9BACT
Putative aconitate hydratase 2 {ECO:0000313|EMBL:CDA66639.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
aconitate hydratase
L2_013_000G1_scaffold_350_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15962..16675
DNA (714bp) protein (238aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Prevotella RepID=R6BTS3_9BACT
trmD; tRNA (guanine-N(1)-)-methyltransferase
L2_013_000G1_scaffold_350_16

Not on your lists

comp(16822..17673)
DNA (852bp) protein (284aa)
Serine protease n=1 Tax=human gut metagenome RepID=K1U3P2_9ZZZZ
Serine protease {ECO:0000313|EMBL:EKC79872.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative esterase of the alpha-beta hydrolase superfamily
L2_013_000G1_scaffold_350_17
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17883..19289
DNA (1407bp) protein (469aa)
Peptidase, M24 family {ECO:0000313|EMBL:EFB35768.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFB35768.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Peptidase, M24 family n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBU2_9BACT
Xaa-Pro aminopeptidase
L2_013_000G1_scaffold_350_18
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19373..20584
DNA (1212bp) protein (404aa)
Putative cysteine peptidase n=2 Tax=root RepID=R6BRA2_9BACT
Putative cysteine peptidase {ECO:0000313|EMBL:CDA66643.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_350_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20851..22572
DNA (1722bp) protein (574aa)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Prevotella RepID=D1PBT9_9BACT
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDA66644.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
single-stranded-DNA-specific exonuclease RecJ
L2_013_000G1_scaffold_350_20
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22690..24585
DNA (1896bp) protein (632aa)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:EFB35764.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFB35764.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ATP-dependent DNA helicase, RecQ family (EC:3.6.1.-)
ATP-dependent DNA helicase, RecQ family n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBT8_9BACT
L2_013_000G1_scaffold_350_21
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24728..25762)
DNA (1035bp) protein (345aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=root RepID=D1PBT7_9BACT
L2_013_000G1_scaffold_350_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25968..26771)
DNA (804bp) protein (268aa)
Putative Acyl-ACP thioesterase n=2 Tax=root RepID=R6CN07_9BACT
Putative Acyl-ACP thioesterase {ECO:0000313|EMBL:CDA66647.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
acyl-ACP thioesterase
L2_013_000G1_scaffold_350_23
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26900..27445)
DNA (546bp) protein (182aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EFB35761.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFB35761.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Acetolactate synthase, small subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBT5_9BACT
acetolactate synthase, small subunit
L2_013_000G1_scaffold_350_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27552..29267)
DNA (1716bp) protein (572aa)
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit n=2 Tax=root RepID=R6C066_9BACT
Acetolactate synthase large subunit {ECO:0000313|EMBL:CDA66649.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L2_013_000G1_scaffold_350_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29351..31153)
DNA (1803bp) protein (601aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=root RepID=R6BTT2_9BACT
L2_013_000G1_scaffold_350_26
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31535..32662)
DNA (1128bp) protein (376aa)
OmpA family protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBT2_9BACT
OmpA family protein {ECO:0000313|EMBL:EFB35758.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_350_27
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32919..35519)
DNA (2601bp) protein (867aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBT1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35757.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
alpha-L-arabinofuranosidase
L2_013_000G1_scaffold_350_28
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35690..36568)
DNA (879bp) protein (293aa)
Bifunctional protein FolD n=2 Tax=root RepID=R6C068_9BACT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain-containing protein
L2_013_000G1_scaffold_350_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(36647..37999)
DNA (1353bp) protein (451aa)
Signal recognition particle protein n=2 Tax=Prevotella RepID=D1PBS9_9BACT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ffh; signal recognition particle protein
L2_013_000G1_scaffold_350_30
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38142..38801)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBS8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB35754.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
Displaying items 1-30 of 70 in total

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