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L2_013_000G1_scaffold_356

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_356_1
unknown

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2..124
DNA (123bp) protein (41aa)

This feature has no annotations

L2_013_000G1_scaffold_356_2
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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147..1550
DNA (1404bp) protein (468aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7ED80_9FIRM
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CDD99452.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L2_013_000G1_scaffold_356_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1686..3584
DNA (1899bp) protein (633aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z335_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN30777.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted ATP-dependent endonuclease of the OLD family
L2_013_000G1_scaffold_356_4
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3606..5978
DNA (2373bp) protein (791aa)
Sugar binding domain protein glycosyl hydrolase family 2 n=2 Tax=Lachnospiraceae RepID=R7EH70_9FIRM
Sugar binding domain protein glycosyl hydrolase family 2 {ECO:0000313|EMBL:CDE01643.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
glycoside hydrolase family protein
L2_013_000G1_scaffold_356_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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6188..8737
DNA (2550bp) protein (850aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R608_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34199.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_013_000G1_scaffold_356_6
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8882..10513
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E6I2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98524.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_013_000G1_scaffold_356_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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10661..11479
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35095.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
cytochrome c biogenesis protein transmembrane subunit
L2_013_000G1_scaffold_356_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(11591..12244)
DNA (654bp) protein (218aa)
Chloramphenicol O-acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJZ1_9FIRM
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:CCZ35096.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_013_000G1_scaffold_356_9
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(12262..12987)
DNA (726bp) protein (242aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQH6_9FIRM
glucosamine-6-phosphate isomerase
L2_013_000G1_scaffold_356_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13035..13922)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003706B61
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI66203.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
AraC family transcriptional regulator
L2_013_000G1_scaffold_356_11
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14201..15121
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E6I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98529.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
dTDP-glucose pyrophosphorylase
L2_013_000G1_scaffold_356_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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15112..16236
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35102.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Phosphotransferase enzyme family.
L2_013_000G1_scaffold_356_13
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16466..19999
DNA (3534bp) protein (1178aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=3 Tax=Lachnospiraceae RepID=C9L6L3_BLAHA
L2_013_000G1_scaffold_356_14
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20314..20961
DNA (648bp) protein (216aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Blautia producta RepID=UPI00036C9283
Uncharacterized protein {ECO:0000313|EMBL:CCX59175.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L2_013_000G1_scaffold_356_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

21290..22093
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R6Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36373.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_013_000G1_scaffold_356_16
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22142..25063
DNA (2922bp) protein (974aa)
Peptidase M16 family n=1 Tax=Blautia sp. CAG:52 RepID=R6G4M0_9FIRM
Peptidase M16 family {ECO:0000313|EMBL:CDB20463.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_013_000G1_scaffold_356_17
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25082..25987
DNA (906bp) protein (302aa)
GTPase Era n=1 Tax=Blautia sp. CAG:52 RepID=R6H2G2_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
GTP-binding protein Era
L2_013_000G1_scaffold_356_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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25993..26739
DNA (747bp) protein (249aa)
DNA repair protein RecO n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R597_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
DNA replication and repair protein RecO
L2_013_000G1_scaffold_356_19
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26840..27460
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E891_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98536.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L2_013_000G1_scaffold_356_20
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27613..29007
DNA (1395bp) protein (465aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EAG7_9FIRM
L2_013_000G1_scaffold_356_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29418..31526
DNA (2109bp) protein (703aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Beta-galactosidase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CU71_9CLOT
glycoside hydrolase
L2_013_000G1_scaffold_356_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(31693..32466)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36031.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_013_000G1_scaffold_356_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

32784..34034
DNA (1251bp) protein (417aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT70_9FIRM
L2_013_000G1_scaffold_356_24
unknown

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34520..34858
DNA (339bp) protein (113aa)

This feature has no annotations

L2_013_000G1_scaffold_356_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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34992..37622
DNA (2631bp) protein (877aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R655_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36033.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_013_000G1_scaffold_356_26
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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37856..38302
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6SIL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC59795.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L2_013_000G1_scaffold_356_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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38321..40942
DNA (2622bp) protein (874aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-exporting ATPase n=1 Tax=Dorea sp. CAG:317 RepID=R6WUA5_9FIRM
Copper-exporting ATPase {ECO:0000313|EMBL:CDD07596.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_013_000G1_scaffold_356_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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41351..42304
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42743.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Dipeptidase
L2_013_000G1_scaffold_356_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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42319..43239
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42742.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
aldo/keto reductase
L2_013_000G1_scaffold_356_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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44837..46990
DNA (2154bp) protein (718aa)
CRISPR-associated helicase Cas3 domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YUZ5_9CLOT
CRISPR-associated helicase Cas3 domain protein {ECO:0000313|EMBL:EGB94715.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
CRISPR-associated helicase, Cas3 family
Displaying items 1-30 of 57 in total

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