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L2_013_000G1_scaffold_387

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_387_1
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(96..2027)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EK23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00240.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_013_000G1_scaffold_387_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

2150..2791
DNA (642bp) protein (214aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ESW0_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
CoA-binding domain-containing protein
L2_013_000G1_scaffold_387_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2948..3586
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VWQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03158.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_000G1_scaffold_387_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3588..5102
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W8L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03159.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L2_013_000G1_scaffold_387_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5099..6298
DNA (1200bp) protein (400aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W190_9CLOT
L2_013_000G1_scaffold_387_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6372..6713
DNA (342bp) protein (114aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
mRNA interferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6WG63_9CLOT
Growth inhibitor
L2_013_000G1_scaffold_387_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6769..8169
DNA (1401bp) protein (467aa)
Uncharacterized protein n=3 Tax=root RepID=R6X9Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03162.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_000G1_scaffold_387_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8251..8979
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein BN808_00482 n=1 Tax=Clostridium sp. CAG:91 RepID=R6VWQ3_9CLOT
Probable transcriptional regulatory protein BN808_00482 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
conserved hypothetical protein TIGR01033
L2_013_000G1_scaffold_387_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9003..9947
DNA (945bp) protein (315aa)
Glycosyltransferases involved in cell wall biogenesis (EC:3.1.26.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W8L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03164.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_000G1_scaffold_387_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

9947..11521
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ESV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00229.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_013_000G1_scaffold_387_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11628..12371
DNA (744bp) protein (248aa)
Clp protease n=1 Tax=Clostridium sp. CAG:91 RepID=R6VSB6_9CLOT
Clp protease {ECO:0000313|EMBL:CDC99925.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
peptidase S14 ClpP
L2_013_000G1_scaffold_387_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12416..15271
DNA (2856bp) protein (952aa)
Uncharacterized protein n=2 Tax=root RepID=R6X0F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99922.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
DNA translocase FtsK
L2_013_000G1_scaffold_387_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15314..16984
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=root RepID=R6VZI3_9CLOT
L2_013_000G1_scaffold_387_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17003..17857
DNA (855bp) protein (285aa)
5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Clostridium sp. CAG:91 RepID=R6W6X9_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_000G1_scaffold_387_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17862..19334
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99914.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
TPR domain-containing protein
L2_013_000G1_scaffold_387_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19363..20241
DNA (879bp) protein (293aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X0E4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99912.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_000G1_scaffold_387_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20292..21677
DNA (1386bp) protein (462aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.4.1.14 1.97.-.-)
Glutamate synthase n=2 Tax=root RepID=R6VSA4_9CLOT
Glutamate synthase {ECO:0000313|EMBL:CDC99910.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_000G1_scaffold_387_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21722..22021
DNA (300bp) protein (100aa)
Stress responsive A/B barrel domain protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZH2_9CLOT
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:CDC99909.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
stress responsive alpha-beta barrel domain-containing protein
L2_013_000G1_scaffold_387_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22037..22936
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VMR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99908.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_000G1_scaffold_387_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22933..23415
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:91 RepID=R6X0D8_9CLOT
conserved hypothetical protein TIGR00246
L2_013_000G1_scaffold_387_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

23435..24070
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FDU5_9FIRM
L2_013_000G1_scaffold_387_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24109..25413
DNA (1305bp) protein (435aa)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VSA0_9CLOT
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:CDC99905.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
pyrimidine-nucleoside phosphorylase
L2_013_000G1_scaffold_387_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25519..25731
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99904.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_000G1_scaffold_387_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25756..26991
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VMQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99903.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sporulation protein YqfD
L2_013_000G1_scaffold_387_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26999..28012
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X0D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99902.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_013_000G1_scaffold_387_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28015..29190
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VS97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99900.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_000G1_scaffold_387_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29174..29689
DNA (516bp) protein (172aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:91 RepID=R6VMQ5_9CLOT
hypothetical protein
L2_013_000G1_scaffold_387_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29723..31321
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W6W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99896.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_013_000G1_scaffold_387_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31406..32068
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=root RepID=R6VZF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99894.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_000G1_scaffold_387_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32092..33318
DNA (1227bp) protein (409aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VMQ0_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDC99893.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Predicted flavoproteins
Displaying items 1-30 of 66 in total

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