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L2_013_000G1_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_429_1
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(428..1243)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4AZZ5_CLODI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90160.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_000G1_scaffold_429_2
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1240..1722)
DNA (483bp) protein (161aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WM21_EGGLE
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV54575.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_000G1_scaffold_429_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1741..2286)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4B2X2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI02193.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L2_013_000G1_scaffold_429_4
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2442..3737)
DNA (1296bp) protein (432aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Tyrosine--tRNA ligase n=2 Tax=Eggerthella RepID=E5XAB2_9ACTN
tyrosyl-tRNA synthetase
L2_013_000G1_scaffold_429_5
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3875..6397)
DNA (2523bp) protein (841aa)
Peptidase U32 n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WM18_EGGLE
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ACV54572.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_000G1_scaffold_429_6
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6559..8727
DNA (2169bp) protein (723aa)
Glycosyl transferase family 51 n=3 Tax=Eggerthella RepID=C8WM17_EGGLE
Transglycosylase {ECO:0000313|EMBL:EGC90096.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
glycosyl transferase family protein
L2_013_000G1_scaffold_429_7
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8794..9903)
DNA (1110bp) protein (370aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
3-isopropylmalate dehydrogenase n=3 Tax=Eggerthella RepID=C8WM16_EGGLE
3-isopropylmalate dehydrogenase
L2_013_000G1_scaffold_429_8
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9908..10405)
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
3-isopropylmalate dehydratase small subunit n=3 Tax=Eggerthella RepID=C8WM15_EGGLE
3-isopropylmalate dehydratase small subunit
L2_013_000G1_scaffold_429_9
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10420..11688)
DNA (1269bp) protein (423aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
3-isopropylmalate dehydratase large subunit n=3 Tax=Eggerthella RepID=C8WM14_EGGLE
3-isopropylmalate dehydratase large subunit
L2_013_000G1_scaffold_429_10
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11843..12328)
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WM13_EGGLE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90292.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_000G1_scaffold_429_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12659..13564)
DNA (906bp) protein (302aa)
Putative peptidoglycan binding domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BIP9_CLODI
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EQI08946.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
peptidoglycan-binding domain 1 protein
L2_013_000G1_scaffold_429_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13707..14756)
DNA (1050bp) protein (350aa)
Bifunctional short chain isoprenyl diphosphate synthase {ECO:0000313|EMBL:EQI08944.1}; EC=2.5.1.10 {ECO:0000313|EMBL:EQI08944.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Bifunctional short chain isoprenyl diphosphate synthase n=1 Tax=Clostridium difficile F501 RepID=T4BM99_CLODI
polyprenyl synthetase
L2_013_000G1_scaffold_429_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15142..16125)
DNA (984bp) protein (328aa)
Ppx/GppA phosphatase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BIP1_CLODI
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EQI08936.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Ppx/GppA phosphatase
L2_013_000G1_scaffold_429_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16138..16794)
DNA (657bp) protein (219aa)
Septum formation initiator family protein n=1 Tax=Clostridium difficile F501 RepID=T4BLY7_CLODI
Septum formation initiator family protein {ECO:0000313|EMBL:EQI08948.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
septum formation initiator
L2_013_000G1_scaffold_429_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17343..17723)
DNA (381bp) protein (127aa)
Iron dependent repressor, N-terminal DNA binding domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BM91_CLODI
Iron dependent repressor, N-terminal DNA binding domain protein {ECO:0000313|EMBL:EQI08934.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
DtxR family iron (metal) dependent repressor
L2_013_000G1_scaffold_429_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18126..18356)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BFT6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI08947.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L2_013_000G1_scaffold_429_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18495..20861)
DNA (2367bp) protein (789aa)
Ferrous iron transport protein B n=1 Tax=Clostridium difficile F501 RepID=T4BFS6_CLODI
Ferrous iron transport protein B {ECO:0000313|EMBL:EQI08937.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
ferrous iron transporter FeoB
L2_013_000G1_scaffold_429_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21133..21375)
DNA (243bp) protein (81aa)
FeoA domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BI44_CLODI
FeoA domain protein {ECO:0000313|EMBL:EQI08935.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
FeoA family protein
L2_013_000G1_scaffold_429_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21525..21830)
DNA (306bp) protein (102aa)
FeoA domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BFT1_CLODI
FeoA domain protein {ECO:0000313|EMBL:EQI08942.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Fe2+ transport system protein A
L2_013_000G1_scaffold_429_20
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22038..24071)
DNA (2034bp) protein (678aa)
Copper-translocating P-type ATPase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WLZ9_EGGLE
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ACV54553.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
copper-translocating P-type ATPase
L2_013_000G1_scaffold_429_21
unknown

Not on your lists

comp(24214..24432)
DNA (219bp) protein (73aa)

This feature has no annotations

L2_013_000G1_scaffold_429_22
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24863..25753)
DNA (891bp) protein (297aa)
SMF family protein n=2 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RNH8_FIBSS
Protein smf
Protein smf {ECO:0000313|EMBL:CDM56308.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
L2_013_000G1_scaffold_429_23
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25959..27527
DNA (1569bp) protein (523aa)
Threonine synthase {ECO:0000313|EMBL:EGC90103.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EGC90103.1};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Threonine synthase n=3 Tax=Eggerthella RepID=C8WLZ8_EGGLE
threonine synthase
L2_013_000G1_scaffold_429_24
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27569..27913
DNA (345bp) protein (115aa)
LysR family Bacterial regulatory helix-turn-helix protein n=4 Tax=Bacteria RepID=E5XA90_9ACTN
putative ModE family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGC89980.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_000G1_scaffold_429_25
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27947..28588)
DNA (642bp) protein (214aa)
Two component transcriptional regulator, LuxR family n=2 Tax=Eggerthella RepID=C8WLZ6_EGGLE
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV54550.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_000G1_scaffold_429_26
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28585..29772)
DNA (1188bp) protein (396aa)
Histidine kinase n=2 Tax=Eggerthella RepID=E5XA88_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74036.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
histidine kinase
L2_013_000G1_scaffold_429_27
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29880..30815
DNA (936bp) protein (312aa)
ABC transporter related n=3 Tax=Eggerthella RepID=C8WLZ4_EGGLE
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACV54548.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_000G1_scaffold_429_28
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30828..32048
DNA (1221bp) protein (407aa)
ABC-2 transporter family protein n=3 Tax=Bacteria RepID=T4B473_CLODI
Putative membrane protein {ECO:0000313|EMBL:EGC89938.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L2_013_000G1_scaffold_429_29
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32035..33270
DNA (1236bp) protein (412aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WLZ2_EGGLE
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EGC90125.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_000G1_scaffold_429_30
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33377..33841)
DNA (465bp) protein (155aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WLZ1_EGGLE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90228.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Displaying items 1-30 of 64 in total

View Taxonomy