ggKbase home page

L2_013_000G1_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_512_1
Shuttleworthia satelles, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEP28205.1}; TaxID=626523 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia satelles DSM 14600.;"
L2_013_000G1_scaffold_512_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(373..498)
DNA (126bp) protein (42aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37067.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_013_000G1_scaffold_512_3
unknown

Not on your lists

comp(555..674)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_013_000G1_scaffold_512_4
unknown

Not on your lists

comp(677..1087)
DNA (411bp) protein (137aa)

This feature has no annotations

L2_013_000G1_scaffold_512_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1326..1991)
DNA (666bp) protein (222aa)
Collagen triple helix repeat protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C525_9CLOT
Collagen triple helix repeat protein {ECO:0000313|EMBL:EEG72793.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
collagen triple helix repeat-containing protein
L2_013_000G1_scaffold_512_6
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2007..2822)
DNA (816bp) protein (272aa)
Protein with collagen triple helix repeats {ECO:0000313|EMBL:EXG86226.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L2_013_000G1_scaffold_512_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2828..4318)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P8A1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06112.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
phage minor structural protein
L2_013_000G1_scaffold_512_8
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4329..5057)
DNA (729bp) protein (243aa)
Phage tail tape measure protein TP901 family core region n=1 Tax=Clostridium sp. CAG:352 RepID=R6QXE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ48072.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L2_013_000G1_scaffold_512_9
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5121..9635)
DNA (4515bp) protein (1505aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus K02 RepID=R9UL85_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN70604.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
L2_013_000G1_scaffold_512_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9778..10227)
DNA (450bp) protein (150aa)
Hypothetical phage protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G007_9CLOT
Hypothetical phage protein {ECO:0000313|EMBL:CDB14676.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L2_013_000G1_scaffold_512_11
Clostridium phage phiCD146, Caudovirales, Viruses

Not on your lists

comp(10241..11113)
DNA (873bp) protein (291aa)
Uncharacterized protein n=10 Tax=root RepID=T2ZD03_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CEK40341.1}; TaxID=1582151 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phiCD146.;"
phage capsid family protein
L2_013_000G1_scaffold_512_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11132..11485)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4ATJ0_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CEP46407.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_013_000G1_scaffold_512_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11482..11820)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W1X4_CLOBI
Uncharacterised protein {ECO:0000313|EMBL:CEP88619.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_013_000G1_scaffold_512_14
unknown

Not on your lists

comp(11820..12179)
DNA (360bp) protein (120aa)

This feature has no annotations

L2_013_000G1_scaffold_512_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12184..12456)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W1R8_CLOBI
Uncharacterised protein {ECO:0000313|EMBL:CEP46431.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L2_013_000G1_scaffold_512_16
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12470..13771)
DNA (1302bp) protein (434aa)
Prophage LambdaCh01, coat protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LJE6_9FIRM
Prophage LambdaCh01, coat protein {ECO:0000313|EMBL:EFU78080.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
prophage LambdaCh01,coat protein
L2_013_000G1_scaffold_512_17
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13785..14375)
DNA (591bp) protein (197aa)
Scaffold protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q0U5_CLONN
scaffold protein
Scaffold protein {ECO:0000313|EMBL:ABK61371.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
L2_013_000G1_scaffold_512_18
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14503..15009)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9YHG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23327.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_013_000G1_scaffold_512_19
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15066..15449)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00037ABFA3
Uncharacterized protein {ECO:0000313|EMBL:EJR46430.1}; TaxID=1053228 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD102.;"
hypothetical protein
L2_013_000G1_scaffold_512_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15755..15997)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9YMD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08972.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_013_000G1_scaffold_512_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15966..17363)
DNA (1398bp) protein (466aa)
Phage minor capsid protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EWT5_CLOTA
Exonuclease SbcC {ECO:0000313|EMBL:CEP88604.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage minor capsid protein
L2_013_000G1_scaffold_512_22
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17363..18829)
DNA (1467bp) protein (489aa)
Phage portal , SPP1 Gp6-like family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W262_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGG81074.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
L2_013_000G1_scaffold_512_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18835..20034)
DNA (1200bp) protein (400aa)
Phage terminase, large subunit, PBSX family n=2 Tax=Clostridium difficile RepID=T2YMG3_CLODI
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EQE68023.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
phage terminase
L2_013_000G1_scaffold_512_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20021..20734)
DNA (714bp) protein (238aa)
Phage terminase small subunit n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CR49_9CLOT
Phage terminase small subunit {ECO:0000313|EMBL:ENZ63538.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Phage terminase small subunit
L2_013_000G1_scaffold_512_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20868..21191
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37129.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Response regulator containing a CheY-like receiver domain and a GGDEF domain
L2_013_000G1_scaffold_512_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21285..21698)
DNA (414bp) protein (138aa)
Toxin-antitoxin system, antitoxin component, HicB family n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KP98_9FIRM
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EDK23780.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_013_000G1_scaffold_512_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21762..21935)
DNA (174bp) protein (58aa)
Toxin-antitoxin system, toxin component, HicA family n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KP97_9FIRM
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EDK23779.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_013_000G1_scaffold_512_28
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22160..22579)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J8Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27632.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L2_013_000G1_scaffold_512_29
unknown

Not on your lists

comp(22560..22730)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_013_000G1_scaffold_512_30
unknown

Not on your lists

comp(22742..22924)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 1-30 of 75 in total

View Taxonomy