ggKbase home page

L2_013_000G1_scaffold_583

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_583_1

Not on your lists

330..3677
DNA (3348bp) protein (1116aa)
Type III restriction protein, res subunit n=1 Tax=gut metagenome RepID=J9CBT4_9ZZZZ
Type III restriction protein, res subunit {ECO:0000313|EMBL:EJW97410.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
type I restriction-modification system, R subunit
L2_013_000G1_scaffold_583_2
unknown

Not on your lists

comp(3718..3861)
DNA (144bp) protein (48aa)

This feature has no annotations

L2_013_000G1_scaffold_583_3
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3990..5420
DNA (1431bp) protein (477aa)
Divergent AAA domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1P9D8_9BACT
Divergent AAA domain protein {ECO:0000313|EMBL:EFB36780.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
putative transcriptional regulator
L2_013_000G1_scaffold_583_4
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5486..6286
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C4P8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66436.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_583_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6289..6588
DNA (300bp) protein (100aa)
Thioredoxin n=2 Tax=environmental samples RepID=R6CMF1_9BACT
Thioredoxin {ECO:0000313|EMBL:CDA66437.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
thioredoxin
L2_013_000G1_scaffold_583_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6615..6896
DNA (282bp) protein (94aa)
Membrane protein containing DUF1294 n=2 Tax=root RepID=K1UPI2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDA66439.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
phosphoesterase
L2_013_000G1_scaffold_583_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6921..7484
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=R6BT76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66440.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
flavin reductase-like protein
L2_013_000G1_scaffold_583_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7513..8553
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C4Q5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66441.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
PF06224 family protein
L2_013_000G1_scaffold_583_9
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8554..8787
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Prevotella stercorea DSM 18206 RepID=G6AXU0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHJ40148.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
hypothetical protein
L2_013_000G1_scaffold_583_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8800..9468
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1P9E9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB36717.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_583_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9629..10519
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Prevotella copri CAG:164 RepID=R6CMG3_9BACT
Transcriptional regulator {ECO:0000313|EMBL:CDA66447.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
DNA-binding domain-containing protein
L2_013_000G1_scaffold_583_12
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10619..11377
DNA (759bp) protein (253aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BQR1_9BACT
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:CDA66448.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Carboxymuconolactone decarboxylase
L2_013_000G1_scaffold_583_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11389..12069
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BZJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66449.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_583_14
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12072..12590
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Prevotella stercorea DSM 18206 RepID=G6AXJ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHJ40406.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
L2_013_000G1_scaffold_583_15
unknown

Not on your lists

comp(12575..12673)
DNA (99bp) protein (33aa)

This feature has no annotations

L2_013_000G1_scaffold_583_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13225..16458
DNA (3234bp) protein (1078aa)
MdsD protein n=2 Tax=root RepID=R6C4R4_9BACT
MdsD protein {ECO:0000313|EMBL:CDA66451.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
peptidase, S41 family
L2_013_000G1_scaffold_583_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16670..17656
DNA (987bp) protein (329aa)
Signal recognition particle receptor FtsY n=1 Tax=Prevotella copri CAG:164 RepID=R6CMG9_9BACT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ftsY; recognition particle-docking protein FtsY
L2_013_000G1_scaffold_583_18
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17660..18961
DNA (1302bp) protein (434aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.1.1.- 2.8.1.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Prevotella copri CAG:164 RepID=R6BQR7_9BACT
L2_013_000G1_scaffold_583_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19019..19309
DNA (291bp) protein (97aa)
DNA-binding protein HU n=2 Tax=Prevotella RepID=D1P986_9BACT
SPBc2 prophage-derived DNA-binding protein HU 2 {ECO:0000313|EMBL:CDA66454.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_583_20
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19306..20700
DNA (1395bp) protein (465aa)
DNA-binding protein HU n=1 Tax=Prevotella copri DSM 18205 RepID=D1P985_9BACT
DNA-binding protein HU {ECO:0000313|EMBL:EFB36696.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_583_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20781..21905)
DNA (1125bp) protein (375aa)
Thiol-disulfide oxidoreductase ResA n=1 Tax=Prevotella copri CAG:164 RepID=R6C4R9_9BACT
Thiol-disulfide oxidoreductase ResA {ECO:0000313|EMBL:CDA66456.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
thiol-disulfide isomerase-like thioredoxin
L2_013_000G1_scaffold_583_22
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21982..22635)
DNA (654bp) protein (218aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Prevotella copri DSM 18205 RepID=D1P983_9BACT
queuosine biosynthesis protein QueC
L2_013_000G1_scaffold_583_23
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22681..24165)
DNA (1485bp) protein (495aa)
DNA repair protein radA n=1 Tax=Prevotella copri DSM 18205 RepID=D1P982_9BACT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
radA; DNA repair protein RadA
L2_013_000G1_scaffold_583_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24489..25736
DNA (1248bp) protein (416aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=2 Tax=root RepID=R6BZL2_9BACT
L2_013_000G1_scaffold_583_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25978..27672
DNA (1695bp) protein (565aa)
Putative potassium uptake protein TrkA n=2 Tax=root RepID=R6BT99_9BACT
Putative potassium uptake protein TrkA {ECO:0000313|EMBL:CDA66460.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
putative permease
L2_013_000G1_scaffold_583_26
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27896..28924
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1P978_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB36689.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_000G1_scaffold_583_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28930..29415
DNA (486bp) protein (162aa)
Methylmalonyl-CoA decarboxylase gamma subunit n=1 Tax=Prevotella copri CAG:164 RepID=R6CMH9_9BACT
Methylmalonyl-CoA decarboxylase gamma subunit {ECO:0000313|EMBL:CDA66462.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
biotin carboxyl carrier protein
L2_013_000G1_scaffold_583_28
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29510..30658
DNA (1149bp) protein (383aa)
Methylmalonyl-CoA decarboxylase beta subunit n=1 Tax=Prevotella copri CAG:164 RepID=R6BQS9_9BACT
Methylmalonyl-CoA decarboxylase beta subunit {ECO:0000313|EMBL:CDA66463.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
sodium ion-translocating decarboxylase subunit beta
L2_013_000G1_scaffold_583_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30777..31580)
DNA (804bp) protein (268aa)
Putative lipoprotein n=1 Tax=Prevotella copri CAG:164 RepID=R6BZM0_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDA66464.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_000G1_scaffold_583_30

Not on your lists

comp(31626..32180)
DNA (555bp) protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EKC50024.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EKC50024.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=2 Tax=root RepID=R6BTA4_9BACT
Displaying items 1-30 of 56 in total

View Taxonomy