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L2_013_000G1_scaffold_610

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_610_1
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(54..815)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO54046.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_000G1_scaffold_610_2
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1119..1295
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO51503.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_610_3
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1401..2216)
DNA (816bp) protein (272aa)
Putative Fe-S cluster / 4Fe-4S binding domain multi-domain protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0RBS3_9FIRM
Putative Fe-S cluster / 4Fe-4S binding domain multi-domain protein {ECO:0000313|EMBL:EIC97131.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
RnfABCDGE type electron transport complex subunit B
L2_013_000G1_scaffold_610_4
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2227..2805)
DNA (579bp) protein (193aa)
Electron transport complex protein RnfA n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWV7_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
electron transport complex, RnfABCDGE type, A subunit
L2_013_000G1_scaffold_610_5
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2805..3626)
DNA (822bp) protein (274aa)
Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWV6_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
RnfABCDGE type electron transport complex subunit E
L2_013_000G1_scaffold_610_6
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3636..4247)
DNA (612bp) protein (204aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWV5_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
electron transport complex, RnfABCDGE type, G subunit
L2_013_000G1_scaffold_610_7
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4244..5203)
DNA (960bp) protein (320aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWV4_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
electron transport complex, RnfABCDGE type, D subunit
L2_013_000G1_scaffold_610_8
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5203..6549)
DNA (1347bp) protein (449aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWV3_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
electron transport complex, RnfABCDGE type, C subunit
L2_013_000G1_scaffold_610_9
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7009..8778)
DNA (1770bp) protein (590aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWV2_9FIRM
L2_013_000G1_scaffold_610_10
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8879..9439)
DNA (561bp) protein (187aa)
Elongation factor P n=2 Tax=Lachnoanaerobaculum saburreum RepID=E6LMZ4_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
translation elongation factor P (EF-P)
L2_013_000G1_scaffold_610_11
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9515..9955)
DNA (441bp) protein (147aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
3-dehydroquinate dehydratase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWV0_9FIRM
3-dehydroquinate dehydratase
L2_013_000G1_scaffold_610_12
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9952..10827)
DNA (876bp) protein (292aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Shikimate dehydrogenase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU9_9FIRM
shikimate 5-dehydrogenase
L2_013_000G1_scaffold_610_13
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10820..11341)
DNA (522bp) protein (174aa)
HAD phosphatase, family IIIA n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU8_9FIRM
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EHO51491.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L2_013_000G1_scaffold_610_14
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11338..11790)
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU7_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
transcriptional regulator NrdR
L2_013_000G1_scaffold_610_15
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11808..12203)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO51489.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_610_16
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12215..13501)
DNA (1287bp) protein (429aa)
galactokinase (EC:2.7.1.6)
GHMP kinase protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU5_9FIRM
GHMP kinase protein {ECO:0000313|EMBL:EHO51488.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_610_17
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13614..14456)
DNA (843bp) protein (281aa)
EDD domain protein, DegV family n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU4_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EHO51487.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
degV family protein
L2_013_000G1_scaffold_610_18
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14666..15079
DNA (414bp) protein (138aa)
TOBE domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU3_9FIRM
TOBE domain protein {ECO:0000313|EMBL:EHO51486.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
molybdenum-pterin-binding protein
L2_013_000G1_scaffold_610_19
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15125..17209)
DNA (2085bp) protein (695aa)
Hsp90 protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWU2_9FIRM
Hsp90 protein {ECO:0000313|EMBL:EHO51485.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Molecular chaperone, HSP90 family
L2_013_000G1_scaffold_610_20
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17300..18823)
DNA (1524bp) protein (508aa)
[FeFe] hydrogenase, group B1/B3 {ECO:0000313|EMBL:EIC96908.1}; EC=1.12.-.- {ECO:0000313|EMBL:EIC96908.1};; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
[FeFe] hydrogenase, group B1/B3 n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0RB50_9FIRM
L2_013_000G1_scaffold_610_21
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19053..19793)
DNA (741bp) protein (247aa)
Sortase B cell surface sorting signal n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWT9_9FIRM
Sortase B cell surface sorting signal {ECO:0000313|EMBL:EHO51482.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Cell surface protein
L2_013_000G1_scaffold_610_22
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19984..22086)
DNA (2103bp) protein (701aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWT8_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EHO51481.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_610_23
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22381..23472
DNA (1092bp) protein (364aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EIC94389.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EIC94389.1};; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R3Y1_9FIRM
L2_013_000G1_scaffold_610_24
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23483..24733
DNA (1251bp) protein (417aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWT5_9FIRM
L2_013_000G1_scaffold_610_25
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24783..25631)
DNA (849bp) protein (283aa)
SCP-like protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWT4_9FIRM
SCP-like protein {ECO:0000313|EMBL:EHO51477.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
cell wall binding repeat-containing protein
L2_013_000G1_scaffold_610_26
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25824..26306
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO51475.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
engC2; GTPase EngC2
L2_013_000G1_scaffold_610_27
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26358..28313)
DNA (1956bp) protein (652aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Threonine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWT1_9FIRM
threonine--tRNA ligase
L2_013_000G1_scaffold_610_28
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28590..29822)
DNA (1233bp) protein (411aa)
NADPH-dependent glutamate synthase beta chain and related oxidoreductases (EC:1.4.1.14 1.4.1.13)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWT0_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EHO51473.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_000G1_scaffold_610_29
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29949..30314)
DNA (366bp) protein (122aa)
Iron dependent repressor, DNA binding domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWS9_9FIRM
Iron dependent repressor, DNA binding domain protein {ECO:0000313|EMBL:EHO51472.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Mn-dependent transcriptional regulator
L2_013_000G1_scaffold_610_30
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30442..32490)
DNA (2049bp) protein (683aa)
Heavy metal translocating P-type ATPase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWS8_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHO51471.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
Displaying items 1-30 of 54 in total

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