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L2_013_000G1_scaffold_656

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_656_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..457
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CH61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68587.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_013_000G1_scaffold_656_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(522..2018)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HX37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29337.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative efflux protein, MATE family
L2_013_000G1_scaffold_656_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2211..2975)
DNA (765bp) protein (255aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
phosphonoacetaldehyde hydrolase (EC:3.11.1.1)
Phosphonoacetaldehyde hydrolase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQR3_9CLOT
L2_013_000G1_scaffold_656_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3002..4105)
DNA (1104bp) protein (368aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGR3_9FIRM
2-aminoethylphosphonate--pyruvate transaminase
L2_013_000G1_scaffold_656_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4257..4883)
DNA (627bp) protein (209aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DGK4_CLOSC
ABC-type Fe3+ transport system, periplasmic component
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:CBK76828.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_013_000G1_scaffold_656_6
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5086..5358)
DNA (273bp) protein (91aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31 3.6.3.30)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Clostridium sp. CAG:149 RepID=R5MNV3_9CLOT
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CCY86687.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_013_000G1_scaffold_656_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5646..6518)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97976.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
RpiR family transcriptional regulator
L2_013_000G1_scaffold_656_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6715..8265)
DNA (1551bp) protein (517aa)
Putative ribulokinase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6M6_9FIRM
Putative ribulokinase {ECO:0000313|EMBL:CCY12823.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
putative sugar kinase
L2_013_000G1_scaffold_656_9
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8381..8818)
DNA (438bp) protein (146aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MHY7_9FIRM
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:EFV01311.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
sugar phosphate isomerase
L2_013_000G1_scaffold_656_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8916..9710)
DNA (795bp) protein (265aa)
HAD hydrolase, family IIA n=2 Tax=Eubacterium RepID=C0EZS7_9FIRM
HAD hydrolase family IIA {ECO:0000313|EMBL:CDB18721.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_000G1_scaffold_656_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9808..10986)
DNA (1179bp) protein (393aa)
3-dehydroquinate synthase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G686_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:CCY12820.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_000G1_scaffold_656_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10979..11968)
DNA (990bp) protein (330aa)
Putative sugar-binding domain protein n=2 Tax=Eubacterium RepID=C0F087_9FIRM
Putative sugar-binding domain protein {ECO:0000313|EMBL:EEG35065.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_000G1_scaffold_656_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12314..12730)
DNA (417bp) protein (139aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWD7_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_013_000G1_scaffold_656_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12743..14140)
DNA (1398bp) protein (466aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATP synthase subunit beta n=2 Tax=Eubacterium RepID=C4ZHY9_EUBR3
F0F1 ATP synthase subunit beta
L2_013_000G1_scaffold_656_15
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14164..15057)
DNA (894bp) protein (298aa)
ATP synthase gamma chain n=1 Tax=Roseburia sp. CAG:45 RepID=R6NAR0_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
F0F1 ATP synthase subunit gamma
L2_013_000G1_scaffold_656_16
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15070..16590)
DNA (1521bp) protein (507aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
ATP synthase subunit alpha n=1 Tax=Roseburia sp. CAG:45 RepID=R6NLB0_9FIRM
ATP synthase F1, alpha subunit
L2_013_000G1_scaffold_656_17
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16596..17114)
DNA (519bp) protein (173aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Roseburia sp. CAG:45 RepID=R6NDD9_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L2_013_000G1_scaffold_656_18
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17095..17544)
DNA (450bp) protein (150aa)
ATP synthase subunit b n=2 Tax=Eubacterium RepID=C4Z2A1_EUBE2
hypothetical protein
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_013_000G1_scaffold_656_19
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17626..17853)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C4Z2A2_EUBE2
hypothetical protein
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L2_013_000G1_scaffold_656_20
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17881..18567)
DNA (687bp) protein (229aa)
ATP synthase subunit a n=1 Tax=Roseburia sp. CAG:45 RepID=R6NAR4_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
F0F1 ATP synthase subunit A
L2_013_000G1_scaffold_656_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19151..19714)
DNA (564bp) protein (188aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G2S2_9FIRM
L2_013_000G1_scaffold_656_22
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19901..20125)
DNA (225bp) protein (75aa)
UPF0291 protein BN498_01543 n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GM72_9FIRM
UPF0291 protein BN498_01543 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_000G1_scaffold_656_23
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20279..22105)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36713.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
oxidoreductase, FAD-binding
L2_013_000G1_scaffold_656_24
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22603..25053)
DNA (2451bp) protein (817aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EV63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36718.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
X-X-X-Leu-X-X-Gly heptad repeats
L2_013_000G1_scaffold_656_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25050..27143)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EV62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17239.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Predicted exporters of the RND superfamily
L2_013_000G1_scaffold_656_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27430..28068
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV61_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG36716.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Transcriptional regulator
L2_013_000G1_scaffold_656_27
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28051..29361)
DNA (1311bp) protein (437aa)
Flavoprotein family protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FZF9_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:CDB18618.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_000G1_scaffold_656_28
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29440..29940)
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Endoribonuclease YbeY n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GCL8_9FIRM
hypothetical protein
L2_013_000G1_scaffold_656_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30090..31133)
DNA (1044bp) protein (348aa)
KH domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8N2_9FIRM
KH domain protein {ECO:0000313|EMBL:CDB18620.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_013_000G1_scaffold_656_30
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31222..32430)
DNA (1209bp) protein (403aa)
Putative sporulation protein YqfD n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GM73_9FIRM
Putative sporulation protein YqfD {ECO:0000313|EMBL:CCY13656.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
stage IV sporulation YqfD
Displaying items 1-30 of 51 in total

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