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L2_013_000G1_scaffold_928

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_928_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..844
DNA (843bp) protein (281aa)
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBK70296.1}; EC=2.7.1.4 {ECO:0000313|EMBL:CBK70296.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Sugar kinases, ribokinase family n=4 Tax=Bifidobacterium longum RepID=D6DCS5_BIFLN
PfkB domain-containing protein
L2_013_000G1_scaffold_928_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1056..2354
DNA (1299bp) protein (433aa)
Uncharacterized conserved protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCS4_BIFLN
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK70295.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_013_000G1_scaffold_928_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2421..3656
DNA (1236bp) protein (412aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCS3_BIFLN
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:KFI73419.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
N-acyl-D-glucosamine 2-epimerase
L2_013_000G1_scaffold_928_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3784..4890)
DNA (1107bp) protein (369aa)
Regulatory protein, LacI n=2 Tax=Bifidobacterium longum RepID=D6ZV23_BIFLJ
Transcriptional regulator, LacI family
Transcriptional regulator {ECO:0000313|EMBL:BAJ71446.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_013_000G1_scaffold_928_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5141..5746)
DNA (606bp) protein (202aa)
Bacterial Ig-like domain, group 1 n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BL54_BIFLN
Bacterial Ig-like domain, group 1 {ECO:0000313|EMBL:EIJ32097.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L2_013_000G1_scaffold_928_6
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5754..6584)
DNA (831bp) protein (277aa)
Glycosyl hydrolase family 85 n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZT7_9BIFI
Glycosyl hydrolase family 85 {ECO:0000313|EMBL:EFV36912.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Endo-beta-N-acetylglucosaminidase
L2_013_000G1_scaffold_928_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6665..7753)
DNA (1089bp) protein (363aa)
Transposase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I4X3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI71457.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
transposase
L2_013_000G1_scaffold_928_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7722..8255)
DNA (534bp) protein (178aa)
Transposase n=11 Tax=Bifidobacterium longum RepID=B3DTH4_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI71457.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
transposase
L2_013_000G1_scaffold_928_9
Bifidobacterium coryneforme, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8610..8960)
DNA (351bp) protein (117aa)
Transcriptional regulator, MarR family n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IPT4_BIFAP
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AII74224.1}; TaxID=1687 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium coryneforme.;"
L2_013_000G1_scaffold_928_10
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9124..9762
DNA (639bp) protein (213aa)
Putative NADH-flavin reductase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4REG6_9BIFI
Putative NADH-flavin reductase {ECO:0000313|EMBL:KFI85400.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
putative NADH-flavin reductase
L2_013_000G1_scaffold_928_11
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9913..11211)
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y151_BIFBU
Uncharacterized protein {ECO:0000313|EMBL:KFI88999.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Conserved hypothetical protein with DUF1237 domain
L2_013_000G1_scaffold_928_12
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11332..14469)
DNA (3138bp) protein (1046aa)
Glycosyl hydrolase family 38, N-terminal domain protein {ECO:0000313|EMBL:KFI86256.1}; EC=3.2.1.24 {ECO:0000313|EMBL:KFI86256.1};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Glycoside hydrolase, family 38 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV30_BIFLJ
family 38 glycoside hydrolase
L2_013_000G1_scaffold_928_13
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14701..17841)
DNA (3141bp) protein (1047aa)
Alpha-mannosidase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCR6_BIFLN
Alpha-mannosidase {ECO:0000313|EMBL:BAR02303.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
alpha-mannosidase
L2_013_000G1_scaffold_928_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18287..19984)
DNA (1698bp) protein (566aa)
Glycosyl hydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPC7_BIFLS
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:KEY32426.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_013_000G1_scaffold_928_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20238..21338)
DNA (1101bp) protein (367aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium RepID=V6XWY8_BIFLN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KFI94490.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Transcriptional regulator, LacI family
L2_013_000G1_scaffold_928_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21353..22471)
DNA (1119bp) protein (373aa)
anaerobic sulfatase maturase n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B47B57
Arylsulfatase-activating protein AslB {ECO:0000313|EMBL:KFI94487.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
arylsulfatase regulator
L2_013_000G1_scaffold_928_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22799..24331)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036F48E8
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31888.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
arylsulfatase A family protein
L2_013_000G1_scaffold_928_18
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24328..26409)
DNA (2082bp) protein (694aa)
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:KFI61249.1}; EC=3.2.1.52 {ECO:0000313|EMBL:KFI61249.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Glycoside hydrolase, family 20 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNQ7_BIFLS
glycosyl hydrolase
L2_013_000G1_scaffold_928_19
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26564..27847)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=I3AY72_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI88992.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L2_013_000G1_scaffold_928_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27878..28705)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Bifidobacterium breve RepID=UPI0002DFD3D8
Transporter
ABC transporter permease component {ECO:0000313|EMBL:BAR00139.1}; ABC transporter, permease protein {ECO:0000313|EMBL:EFE89736.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_013_000G1_scaffold_928_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28698..29699)
DNA (1002bp) protein (334aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium breve RepID=F6C943_BIFBA
Sugar transport system permease protein
ABC transporter permease component {ECO:0000313|EMBL:BAR00140.1}; ABC transporter, permease protein {ECO:0000313|EMBL:EFE89737.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_013_000G1_scaffold_928_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29699..30967)
DNA (1269bp) protein (423aa)
ABC transporter, solute-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C942_BIFBA
ABC transporter substrate-binding protein
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31900.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L2_013_000G1_scaffold_928_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31753..32127
DNA (375bp) protein (125aa)
Major facilitator transporter n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AS74_PLESH
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31893.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
transporter
L2_013_000G1_scaffold_928_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32183..33022
DNA (840bp) protein (280aa)
Major facilitator superfamily MFS_1 n=1 Tax=Serratia proteamaculans (strain 568) RepID=A8GHT6_SERP5
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31893.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
major facilitator transporter
L2_013_000G1_scaffold_928_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33059..33898
DNA (840bp) protein (280aa)
Beta-lactamase domain-containing protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S282_PROA4
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:KFI94480.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Beta-lactamase domain-containing protein
L2_013_000G1_scaffold_928_26
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34012..34854)
DNA (843bp) protein (281aa)
Truncated transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWH4_BIFL1
IS3 family transposase {ECO:0000313|EMBL:KFI83926.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
truncated transposase
L2_013_000G1_scaffold_928_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35317..35595)
DNA (279bp) protein (93aa)
Glycoside hydrolase, family 38 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV30_BIFLJ
glycosyl hydrolase family 38, N-terminal domain protein
Alpha-mannosidase {ECO:0000313|EMBL:ACD97635.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_013_000G1_scaffold_928_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35726..38845)
DNA (3120bp) protein (1040aa)
Alpha-mannosidase {ECO:0000313|EMBL:ESV33828.1}; EC=3.2.1.24 {ECO:0000313|EMBL:ESV33828.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Alpha-mannosidase n=3 Tax=Bifidobacterium longum RepID=V6XXA3_BIFLN
manA1; alpha-mannosidase
L2_013_000G1_scaffold_928_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39006..39494)
DNA (489bp) protein (163aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=Bifidobacterium longum RepID=DTD_BIFLD
dtd; D-tyrosyl-tRNA(Tyr) deacylase
L2_013_000G1_scaffold_928_30
unknown

Not on your lists

39594..39656
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 30 items

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